Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00344 ATGTTGCAACAAGTCATCGATGGTGACGACATAGAAAATCGCTTAGTTCGAAGTTACAAGAGGAGTTTTAATGGTTTTGCTGCCAGACTCAATGATCAACAAAGAGAAAAACTACTCGGCATGAAAGGTGTGCTCTCTGTTTTTCCAAGCCAAAAGTTTCACCTACAAACTACAAGATCATGGGATTTCCTTGGACTTCCTCAATCAATCAAAAGAGATCAAACTATTGAGAGCGGTTTGATAATTGGAGTCATAGACAGCGGAATATGGCCAGAAGCTCAAAGTTTCAATGACAAAGGTCTTGGTCCCATTCCGAAAAAGTGGAAGGGAGTTTGTGCAGGCGGTGGTAACTTTAGTTGTAACAACAAGATCATTGGTGCACGATCTTACACTGTTGGAGAAGACAGTGCAAGAGATTATGCTGGTCATGGAACTCACACATCATCAACAACAAGTGGAAGAGAGGTGAAGGATGCAAGTTTTTATGGTCTTGCAAAAGGCATTGCAAGAGGTGGAGTTCCATCTTCAAGGATTTCTGTATACAAAGTATGCAAAGCAGATGGTAGTTGCAGTGGAAATGACATGTTAGCTGCATTTGATGATGCAATTGCTGATGGAGTTGACATCATCACAATTTCAATTGGGGGCCAAGATGTCTATGAATTTTTGCAAGATCCTATTGCCATTGGTTCTTTTCATGCCATGGAGAAAGGGATACTAACAGTGCAGGCAGCAGGAAATAACGGTCCTTTCCCAAGTCGTGTTTCTAGCGTAGCACCTTGGTTATTTACTGTTGCTGCAACTACCATTGATCGTCAATTTATTGATAAGCTCATTCTTGGAAATGGAAAGACATTTATTGGTAAGTCAATTAATATTGTCCCCTCAAATGGCACAAAATTTCCAATAGCTAAGCGTAATGCGCAAGCTTGCCCAGGTGGATATGTAACTCCTGAAATGTGTGGTTGTATAGACAAAAATATGGTGAGGAATAAGCTTGTTTTGTGTGGAGTACAAGGGGGTGAAAACTTGGCTAATGAGAATGGTGCAATTGGTTCGATCATTAATGTTACACATTCTCGAAATGATAATTCTGATGTGACTCTAAATCCTTCACTCAACTTGGATCCAAAAGACTATGTTCAAGTTCAATCTTACACAAATTCCACTAAATACCCTGTAGCTGAAATTTTGAAGAGTGAGATCTTCCATGACAACAATGCTCCTAGAATTGTCAGTTTCTCTTCTCGTGGCCCAAATTCTTTGGTTCCAGAAATTATGAAACCCGATATAAGTGCCCCTGGAGTGGATATCTTGGCAGCATATTCACCTCAAGCGCCACCCTCAGAGTATCCGGGTGACAATAGAAAGGTCAAATACAACATAATATCTGGAACTTCTATGGCATGTCCCCACGTTGCTGGAGTTGCTGCATATGTAAAATCATTTCATCCAGACTGGTCACCTGCAGCTATCAAATCTGCCATCATGACAACAGCGAAACCGGTGAATGGTAGTTATGATGATATGGTAGGTGAGTTTGCTTATGGATCTGGGAATGTCAATCCACATCAAGCTATTCACCCTGGACTTGTTTATGACATCACTAAGCAAGATTATGTTCAAATGCTTTGTAATTTTGGTTATGATGCTAACAAGATTAAACAGATCAGTGGAGATAATTCAAGTTGCCATGAAGCTTCCAACAGATCATTTGTGAAGGATATAAACTATCCTGCACTGGTGATTCCTATTAAGTCTCATAAACATTTCAATGTCAAGATTCGTAGAACAGTTACAAATGTTGGCTCACCCAACTCCAGCTACAAGGCTATAATCATGCCAATACGAAACATCAAGATTAGTGTGAAACCAAATGTTCTCTCTTTCAGATCATTAAACGAGAAACAATCATTTGTTGTCACTGTTGTTGGGAGAGCACAATCAAATAAAACTGTGTTTTCCTCCTCGCTTGTTTGGTCAGATGGCACCCACAATGTGAAGAGCCCAATCATTGTGCAAAGAATACCCTAA 2034 0.4007 MLQQVIDGDDIENRLVRSYKRSFNGFAARLNDQQREKLLGMKGVLSVFPSQKFHLQTTRSWDFLGLPQSIKRDQTIESGLIIGVIDSGIWPEAQSFNDKGLGPIPKKWKGVCAGGGNFSCNNKIIGARSYTVGEDSARDYAGHGTHTSSTTSGREVKDASFYGLAKGIARGGVPSSRISVYKVCKADGSCSGNDMLAAFDDAIADGVDIITISIGGQDVYEFLQDPIAIGSFHAMEKGILTVQAAGNNGPFPSRVSSVAPWLFTVAATTIDRQFIDKLILGNGKTFIGKSINIVPSNGTKFPIAKRNAQACPGGYVTPEMCGCIDKNMVRNKLVLCGVQGGENLANENGAIGSIINVTHSRNDNSDVTLNPSLNLDPKDYVQVQSYTNSTKYPVAEILKSEIFHDNNAPRIVSFSSRGPNSLVPEIMKPDISAPGVDILAAYSPQAPPSEYPGDNRKVKYNIISGTSMACPHVAGVAAYVKSFHPDWSPAAIKSAIMTTAKPVNGSYDDMVGEFAYGSGNVNPHQAIHPGLVYDITKQDYVQMLCNFGYDANKIKQISGDNSSCHEASNRSFVKDINYPALVIPIKSHKHFNVKIRRTVTNVGSPNSSYKAIIMPIRNIKISVKPNVLSFRSLNEKQSFVVTVVGRAQSNKTVFSSSLVWSDGTHNVKSPIIVQRIP 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00344 677 CDD Peptidases_S8_3 53 500 IPR034197 -
Trre15g00344 677 Gene3D Peptidase S8/S53 domain 79 540 IPR036852 GO:0004252|GO:0006508
Trre15g00344 677 Gene3D - 271 404 - -
Trre15g00344 677 Pfam Peptidase inhibitor I9 4 55 IPR010259 -
Trre15g00344 677 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 1 56 IPR037045 -
Trre15g00344 677 Pfam Subtilase family 78 514 IPR000209 GO:0006508|GO:0008236
Trre15g00344 677 Pfam Fibronectin type-III domain 575 673 IPR041469 -
Trre15g00344 677 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 15 673 IPR045051 -
Trre15g00344 677 FunFam Subtilisin-like protease SBT1.5 79 280 - -
Trre15g00344 677 PRINTS Subtilisin serine protease family (S8) signature 139 152 IPR015500 -
Trre15g00344 677 PRINTS Subtilisin serine protease family (S8) signature 464 480 IPR015500 -
Trre15g00344 677 PRINTS Subtilisin serine protease family (S8) signature 77 96 IPR015500 -
Trre15g00344 677 SUPERFAMILY Subtilisin-like 59 527 IPR036852 GO:0004252|GO:0006508
Trre15g00344 677 CDD PA_subtilisin_like 278 397 - -
Trre15g00344 677 ProSiteProfiles Serine proteases, subtilase domain profile. 60 527 - -
Trre15g00344 677 ProSitePatterns Serine proteases, subtilase family, serine active site. 465 475 IPR023828 -
Trre15g00344 677 Gene3D - 544 676 - -
Trre15g00344 677 FunFam Subtilisin-like protease SBT1.5 544 676 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00344 Trre-Chr15 2367207 2369983 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g00344 1 673 Subtilisin-like Serine Gene Family AT5G59100 53.509 0.0 727
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00344 - - psat:127076787 920.613