Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00343 ATGTCTAAGTATAGTGTTCTTTTATTCTTCTTTGTGTTTGTGGTTTTGTCATCAATAATTTTTTTAGTGTGTGATGGCACTGAAATGGATGATGAAAACAGTAAACTTTATATCGTATATATGGGCTCACTTTCTACGGAAACATCATATTTTCCAACCTATCATCATCTCAACATGTTGCAACAAGTCATCGATGGTGACGACATAGAAAATCGCTTAGTTCGAAGTTACAAGAGGAGTTTTAATGGTTTTGCTGCCAGACTCAATGATCAACAAAGAGAAAAACTACTCGGCATGAAAGGTGTGCTCTCTGTTTTTCCAAGCCAAAAGTTTCACCTACAAACTACAAGATCATGGGATTTCCTTGGACTTCCTCAATCAATCAAAAGAGATCAAACTATTGAGAGCGGTTTGATAATTGGAGTCATAGACAGCGGAATATGGCCAGAAGCTCAAAGTTTCAATGACAAAGGTCTTGGTCCCATTCCGAAAAAGTGGAAGGGAGTTTGTGCAGGCGGTGGTAACTTTAGTTGTAACAACAAGATCATTGGTGCACGATCTTACACTGTTGGAGAAGACAGTGCAAGAGATTATGCTGGTCATGGAACTCACACATCATCAACAACAAGTGGAAGAGAGGTGAAGGATGCAAGTTTTTATGGTCTTGCAAAAGGCATTGCAAGAGGTGGAGTTCCATCTTCAAGGATTTCTGTATACAAAGTATGCAAAGCAGATGGTAGTTGCAGTGGAAATGACATGTTAGCTGCATTTGATGATGCAATTGCTGATGGAGTTGACATCATCACAATTTCAATTGGGGGCCAAGATGTCTATGAATTTTTGCAAGATCCTATTGCCATTGGTTCTTTTCATGCCATGGAGAAAGGGATACTAACAGTGCAGGCAGCAGGAAATAACGGTCCTTTCCCAAGTCGTGTTTCTAGCGTAGCACCTTGGTTATTTACTGTTGCTGCAACTACCATTGATCGTCAATTTATTGATAAGCTCATTCTTGGAAATGGAAAGACATTTATTGGTAAGTCAATTAATATTGTCCCCTCAAATGGCACAAAATTTCCAATAGCTAAGCGTAATGCGCAAGCTTGCCCAGGTGGATATGTAACTCCTGAAATGTGTGGTTGTATAGACAAAAATATGGTGAGGAATAAGCTTGTTTTGTGTGGAGTACAAGGGGGTGAAAACTTGGCTAATGAGAATGGTGCAATTGGTTCGATCATTAATGTTACACATTCTCGAAATGATAATTCTGATGTGACTCTAAATCCTTCACTCAACTTGGATCCAAAAGACTATGTTCAAGTTCAATCTTACACAAATTCCACTAAATACCCTGTAGCTGAAATTTTGAAGAGTGAGATCTTCCATGACAACAATGCTCCTAGAATTGTCAGTTTCTCTTCTCGTGGCCCAAATTCTTTGGTTCCAGAAATTATGAAACCCGATATAAGTGCCCCTGGAGTGGATATCTTGGCAGCATATTCACCTCAAGCGCCACCCTCAGAGTATCCGGGTGACAATAGAAAGGTCAAATACAACATAATATCTGGAACTTCTATGGCATGTCCCCACGTTGCTGGAGTTGCTGCATATGTAAAATCATTTCATCCAGACTGGTCACCTGCAGCTATCAAATCTGCCATCATGACAACAGCGAAACCGGTGAATGGTAGTTATGATGATATGGTAGGTGAGTTTGCTTATGGATCTGGGAATGTCAATCCACATCAAGCTATTCACCCTGGACTTGTTTATGACATCACTAAGCAAGATTATGTTCAAATGCTTTGTAATTTTGGTTATGATGCTAACAAGATTAAACAGATCAGTGGAGATAATTCAAGTTGCCATGAAGCTTCCAACAGATCATTTGTGAAGGATATAAACTATCCTGCACTGGTGATTCCTATTAAGTCTCATAAACATTTCAATGTCAAGATTCGTAGAACAGTTACAAATGTTGGCTCACCCAACTCCAGCTACAAGGCTATAATCATGCCAATACGAAACATCAAGATTAGTGTGAAACCAAATGTTCTCTCTTTCAGATCATTAAACGAGAAACAATCATTTGTTGTCACTGTTGTTGGGAGAGCACAATCAAATAAAACTGTGTTTTCCTCCTCGCTTGTTTGGTCAGATGGCACCCACAATGTGAAGAGCCCAATCATTGTGCAAAGAATACCCTAA 2208 0.394 MSKYSVLLFFFVFVVLSSIIFLVCDGTEMDDENSKLYIVYMGSLSTETSYFPTYHHLNMLQQVIDGDDIENRLVRSYKRSFNGFAARLNDQQREKLLGMKGVLSVFPSQKFHLQTTRSWDFLGLPQSIKRDQTIESGLIIGVIDSGIWPEAQSFNDKGLGPIPKKWKGVCAGGGNFSCNNKIIGARSYTVGEDSARDYAGHGTHTSSTTSGREVKDASFYGLAKGIARGGVPSSRISVYKVCKADGSCSGNDMLAAFDDAIADGVDIITISIGGQDVYEFLQDPIAIGSFHAMEKGILTVQAAGNNGPFPSRVSSVAPWLFTVAATTIDRQFIDKLILGNGKTFIGKSINIVPSNGTKFPIAKRNAQACPGGYVTPEMCGCIDKNMVRNKLVLCGVQGGENLANENGAIGSIINVTHSRNDNSDVTLNPSLNLDPKDYVQVQSYTNSTKYPVAEILKSEIFHDNNAPRIVSFSSRGPNSLVPEIMKPDISAPGVDILAAYSPQAPPSEYPGDNRKVKYNIISGTSMACPHVAGVAAYVKSFHPDWSPAAIKSAIMTTAKPVNGSYDDMVGEFAYGSGNVNPHQAIHPGLVYDITKQDYVQMLCNFGYDANKIKQISGDNSSCHEASNRSFVKDINYPALVIPIKSHKHFNVKIRRTVTNVGSPNSSYKAIIMPIRNIKISVKPNVLSFRSLNEKQSFVVTVVGRAQSNKTVFSSSLVWSDGTHNVKSPIIVQRIP 735
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00343 735 Gene3D - 329 462 - -
Trre15g00343 735 SUPERFAMILY Subtilisin-like 18 645 IPR036852 GO:0004252|GO:0006508
Trre15g00343 735 PRINTS Subtilisin serine protease family (S8) signature 197 210 IPR015500 -
Trre15g00343 735 PRINTS Subtilisin serine protease family (S8) signature 522 538 IPR015500 -
Trre15g00343 735 PRINTS Subtilisin serine protease family (S8) signature 135 154 IPR015500 -
Trre15g00343 735 FunFam Subtilisin-like protease SBT1.5 137 338 - -
Trre15g00343 735 Pfam Subtilase family 136 572 IPR000209 GO:0006508|GO:0008236
Trre15g00343 735 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 37 731 IPR045051 -
Trre15g00343 735 FunFam Subtilisin-like protease SBT1.5 602 734 - -
Trre15g00343 735 FunFam Subtilisin-like protease SBT5.3 27 114 - -
Trre15g00343 735 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 24 114 IPR037045 -
Trre15g00343 735 Gene3D - 602 734 - -
Trre15g00343 735 CDD Peptidases_S8_3 111 558 IPR034197 -
Trre15g00343 735 ProSitePatterns Serine proteases, subtilase family, serine active site. 523 533 IPR023828 -
Trre15g00343 735 Pfam Peptidase inhibitor I9 37 113 IPR010259 -
Trre15g00343 735 Gene3D Peptidase S8/S53 domain 137 598 IPR036852 GO:0004252|GO:0006508
Trre15g00343 735 CDD PA_subtilisin_like 336 455 - -
Trre15g00343 735 Pfam Fibronectin type-III domain 633 731 IPR041469 -
Trre15g00343 735 ProSiteProfiles Serine proteases, subtilase domain profile. 118 585 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00343 Trre-Chr15 2367207 2370157 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g00343 30 731 Subtilisin-like Serine Gene Family AT5G59100 52.875 0.0 752
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00343 - - psat:127076787 974.541