Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00333 ATGAAGCCATTTTCAATTTTTCTCATTTTCATCATCTTCTTCATTGCATCGGCATTAGTTTCTGCAAAGAAAGAGGCTGATGTAACAGAGTTGCAGATTGGCGTTAAGTATAAACCAGCATCATGTGAAGTTCAGGCACACAAAGGTGATAAAGTGAAAGTACACTATCGGGGAAAACTCACCGATGGAACTGTTTTCGATTCTAGCTTTGAAAGAAATAGTCCAATTGATTTTGAGCTTGGTGGTGGTCAAGTGATCAAAGGATGGGACCAAGGATTATTGGGAATGTGTCTCGGTGAGAAGCGGAAATTGAAAATACCAGCAAAACTTGGTTATGGAGAACAGGGCTCCCCACCCACTATTCCAGGTGGTGCAACACTTATATTTGACACTGAGCTTGTCGGAGTGAACGACAAAAGTTTAAGCGGAGAAAAATCGGAACTTTAG 447 0.4116 MKPFSIFLIFIIFFIASALVSAKKEADVTELQIGVKYKPASCEVQAHKGDKVKVHYRGKLTDGTVFDSSFERNSPIDFELGGGQVIKGWDQGLLGMCLGEKRKLKIPAKLGYGEQGSPPTIPGGATLIFDTELVGVNDKSLSGEKSEL 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00333 148 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 49 137 IPR001179 GO:0003755
Trre15g00333 148 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 43 134 IPR001179 GO:0003755
Trre15g00333 148 FunFam Peptidylprolyl isomerase 17 137 - -
Trre15g00333 148 Gene3D - 16 147 IPR046357 GO:0003755
Trre15g00333 148 PANTHER PEPTIDYLPROLYL ISOMERASE 9 139 IPR044609 GO:0000413|GO:0003755|GO:0061077
Trre15g00333 148 SUPERFAMILY FKBP-like 36 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00333 Trre-Chr15 2307066 2309811 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g00333 47 134 Calmodulin-binding Proteins AT3G25230 60.227 3.93e-29 109
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g01077 13 8579324 8584050 Trre15g00333 15 2307066 2309811 PCT