Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00323 ATGTATTCATCATCATCATCTTCATCCACAAATCCTCAATACCTACACGACGTATTCATCAATTTCAGAGGCGAAGACACACGCCGCACATTCGTTTCACATCTTTACGCAGTCCTCTCAAATGCAGGAATCAACACTTTCCTCGACAACGAAAAGCTCGAAAAAGGAGAAGAAATTGGACACGAATTACTTCAAGCAATTGAGGTTTCTCATATATCAATCATAGTTTTCTCAAAAAGTTATGCTGAATCTAGTTGGTGTTTAAATGAATTGGATAAAATTATGGAATGTCGTAGAACTAAAAGTCAAGTTGTTTTGCCTGTTTTTTATGATATTGATCCTTCTGTTGTTAGACATCAGAAAGGTGAATTTGGTAAAGCTTTGGAAGTTAGTGCTAAAAGTAGGTATATAATTGAGGAAGTTATGGAGAGAGTTTTGGATAGATGGAAAAAAGTTTTGACTGAAGCTTCTAGTTTGTCTGGTTTTGATGGAAACACTTTCAGGAGTGACCGTGAATTGGTGAATAAAGTTGTTGAGGCCATTTTGCCAAAACTAGACAACAGCACCTTGCCTATAACTGAATTTCCAGTTGGTTTAGAATCCCATGTGAAGCAAGTGGTTGGGTTGATTGAGAAACAAACGGGCAATGTTTGTATAGTAGGGATCTGGGGCATGGGAGGATCAGGTAAAACAACTGTAGCTAAAGCCGTCTACAATGAAATTCATCGTAGATTTGATTGTACAAGTTTCATCGAAAATATAAGAGAAGTTTGTGAACAGGATACTAGAGGGCATATGCATTTACAACAACAACTTCTTTCAGATGTCCTCAAAACAAAGGAGAAGATACATAGCATTGCGTTGGGGACAAATATGATCCAAAAAGTGGTTTCTGGGAAAAAAGCACTCGTGGTACTTGATGATGTGACTGATTTTCAGCAAATAAAAGTCCTATGTGGGAATTATAAATGTTTTGGTTCTGGAAGTGTGTTAATTGTTACAACCAGAGATGTACACATACTTAAGTTACTTAAAGTTGTCTCCGTCTATAAAATGGAGGAAATGCACAAAACCGAGTCCCTTGAGCTATTCTCTTGGCATGCTTTTAGAAAAGCAAGTCCTAAAGGAGGCTTTGGTGAGCTCTCAAGAAGTGTGGCTGCTTATTGTGGAGGGTTACCATTGGCTCTTGAAGTCCTTGGATCCTACTTATTTGATAGGACAAAACAAGAATGGACAAGTGTACTATCGAAGTTAGAGAGAATTCCCAATGATCAAGTGCATGAGAAGCTGAGAATAAGCTATGATGGTTTAAAGGATGACTTGGTTAAGGATATATTTCTTGACATATGTTGTTTCTTTATTGGTAAGGACAGAGCCTATGTTACAGAGATACTAAATGGCTGCGGACTTTATGCTGATATTGGAATAGCCGTCCTCATAGATCGGAGCCTCCTAAAAGTTGAGAAAAATAACAAGCTTGGAATGCATGATTTAATAAGAGACATGGGAAGAGAAATTGTTCGCGAAAGTTCAGCAAGAGAGCCAGGGAAGCGTAGTCGATTGTGGTTTCACGACGATGTACATGACGTTTTGACAAAAAATACTGGAACAGAAACTGTTGAGGCACTGATTTTGAGCATGCAAAGAACAGGCAGGGTTAGCTTTAGTACCAATGTTTTCCAAGACATGAAGAAATTGAGACTTTTACAACTTGACAGTGTTGACCTCACTGGAGATTTTGGGTATCTTTCCAAACAACTGAGATGGGTCAATTGGCAACGATCTACCTTCAACTCTGTACCCAATGAGTTTGATCAGGAAAATCTCGTTGCTTTTGAATTAAAACATAGCAATGTTAAACAAGTTTGGAAGGAAACCAAGTTGTTGCCGAAGCTAAAAATTCTCAATCTCAGTCATTCCAAGCACTTGCAAAGCACCCCCGACTTTACAAAATTACCGAATCTAGAAAAACTCATTATGAAGGATTGTCCAAGTTTATCCAATATACACTCGTCCATTGGAGATCTAGAGAATCTTCTTCTCATAAATTTGAAGGACTGTTCAAGTCTTGTCAATCTCCCAAGAAAGATGTATAAATTGAGAAAAGTGAAAACTCTCATCATTTCTGGTTGTTCAAAGATTGTCAAATTGGAAGAAGATATAGCGCAAATGAAATCCTTGACAACTCTAATTGCAGCAAACACTGGTGTCAAACAAGTGCCTTTTTCGATTGTTAGATCAAAAAACATTGGATATATATCTCTATGTGGATATGAAGGATTATCACGTGATGTTTTTCCTTCTATCATTTGGTCTTGGATGTCACCAACAATGAATTCCTTAGCACGTATTCCCCCATATGGTGGTATTTCAATGTCTCTTGTTTCCTTGTGTGTAGATAGTAATAATTTGGGTCTGATCTATCAATCACCAATACTTAGCAGCGGTTCAAAACTTAGATGTGTTTCGGTACAGTGTCACTCAGAGATTCAACTAAAACAAGAATTGAGAAGATTTGTTAATGATCTTACTCAGTTGGAAATATCGCATGCATCACAAATCTCAGATCTTTCCTTGAAATCTATTTTGATTGGGATGGGAAGTTGCCACATAGTCAACGAGACTCTTGGCAAGAGCTTATCGCAGGGACTGTCAACCAATGATTCCATTGCTTCTTTTCTTCCGGGTAACAATTTTCCTTCTTGGTTAACCTATACATGTGAAGGATCATCGGTATATTTTCAAGTTCCCGAGGATAGTGATTGTGGAATGAAGGGAATAACTTTATGTGTTATTTATTCATCAACACTCGAAAACATCGCAACTGAATGTCTCGCTAGTGTTTTGGTCATTAATTACACAAAATTCACTATTCAGATATATAAGAGAGACACAGTAATCTCCTTTAATGATGAAGATTGGAAGAGTGTACTATCAAATTTAGAAGTTGGTGACAATGTAGAGATTTTTGTAGCTTTTGGGCATGGATTGACTGTTAAGGAGACGGCTGTTTATCTAATATATGGTCAGTCAACTGCAATGGAAATTGAGCCATCAGATACTGCCGAAGTTGAGCCAATACTTGAAGTGGAGGCGCAACTATCACCTGATGTGAAAACGGAGCCATCACCAGGAGTGGAAGCGCAACTATCACCTGATGTGAAGAAAATGGAGCCATCACCAGGTGTGGAAGCGCAACCATCAACTGATGTGAAAATGGAGTCACCACTTACTGTCAAGATTGAGCCGTCCCCAAAGACAAATGAGAAAATCTTTGTAAGACTTGCAAAGAGCGTGGGAGTTTGTTTTTGCTTGAACCAGAGTCCAAAATTGAGATCTTAG 3342 0.3821 MYSSSSSSSTNPQYLHDVFINFRGEDTRRTFVSHLYAVLSNAGINTFLDNEKLEKGEEIGHELLQAIEVSHISIIVFSKSYAESSWCLNELDKIMECRRTKSQVVLPVFYDIDPSVVRHQKGEFGKALEVSAKSRYIIEEVMERVLDRWKKVLTEASSLSGFDGNTFRSDRELVNKVVEAILPKLDNSTLPITEFPVGLESHVKQVVGLIEKQTGNVCIVGIWGMGGSGKTTVAKAVYNEIHRRFDCTSFIENIREVCEQDTRGHMHLQQQLLSDVLKTKEKIHSIALGTNMIQKVVSGKKALVVLDDVTDFQQIKVLCGNYKCFGSGSVLIVTTRDVHILKLLKVVSVYKMEEMHKTESLELFSWHAFRKASPKGGFGELSRSVAAYCGGLPLALEVLGSYLFDRTKQEWTSVLSKLERIPNDQVHEKLRISYDGLKDDLVKDIFLDICCFFIGKDRAYVTEILNGCGLYADIGIAVLIDRSLLKVEKNNKLGMHDLIRDMGREIVRESSAREPGKRSRLWFHDDVHDVLTKNTGTETVEALILSMQRTGRVSFSTNVFQDMKKLRLLQLDSVDLTGDFGYLSKQLRWVNWQRSTFNSVPNEFDQENLVAFELKHSNVKQVWKETKLLPKLKILNLSHSKHLQSTPDFTKLPNLEKLIMKDCPSLSNIHSSIGDLENLLLINLKDCSSLVNLPRKMYKLRKVKTLIISGCSKIVKLEEDIAQMKSLTTLIAANTGVKQVPFSIVRSKNIGYISLCGYEGLSRDVFPSIIWSWMSPTMNSLARIPPYGGISMSLVSLCVDSNNLGLIYQSPILSSGSKLRCVSVQCHSEIQLKQELRRFVNDLTQLEISHASQISDLSLKSILIGMGSCHIVNETLGKSLSQGLSTNDSIASFLPGNNFPSWLTYTCEGSSVYFQVPEDSDCGMKGITLCVIYSSTLENIATECLASVLVINYTKFTIQIYKRDTVISFNDEDWKSVLSNLEVGDNVEIFVAFGHGLTVKETAVYLIYGQSTAMEIEPSDTAEVEPILEVEAQLSPDVKTEPSPGVEAQLSPDVKKMEPSPGVEAQPSTDVKMESPLTVKIEPSPKTNEKIFVRLAKSVGVCFCLNQSPKLRS 1113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00323 1113 MobiDBLite consensus disorder prediction 1034 1074 - -
Trre15g00323 1113 FunFam Disease resistance protein (TIR-NBS-LRR class) 12 187 - -
Trre15g00323 1113 SUPERFAMILY L domain-like 510 861 - -
Trre15g00323 1113 Gene3D Ribonuclease Inhibitor 527 882 IPR032675 -
Trre15g00323 1113 PRINTS Disease resistance protein signature 296 310 - -
Trre15g00323 1113 PRINTS Disease resistance protein signature 627 643 - -
Trre15g00323 1113 PRINTS Disease resistance protein signature 389 403 - -
Trre15g00323 1113 PRINTS Disease resistance protein signature 219 234 - -
Trre15g00323 1113 Gene3D - 355 438 IPR042197 -
Trre15g00323 1113 Gene3D - 183 349 IPR027417 -
Trre15g00323 1113 Pfam NB-ARC domain 200 424 IPR002182 GO:0043531
Trre15g00323 1113 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 187 449 IPR027417 -
Trre15g00323 1113 Gene3D - 13 182 IPR035897 -
Trre15g00323 1113 SUPERFAMILY Toll/Interleukin receptor TIR domain 5 162 IPR035897 -
Trre15g00323 1113 Pfam TIR domain 16 189 IPR000157 GO:0007165
Trre15g00323 1113 SMART till_3 15 159 IPR000157 GO:0007165
Trre15g00323 1113 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 16 741 IPR044974 GO:0006952
Trre15g00323 1113 ProSiteProfiles TIR domain profile. 14 185 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00323 Trre-Chr15 2215371 2220855 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g00323 16 744 WRKY Transcription Factor Family AT4G12020 29.733 1.62e-83 297
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00323 - - tpra:123923836 1572.76