Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00320 ATGGGAAGAGAAATTGTTCGCGAAAGTTCAGCAAGTGACCCAGGGAAGCGTAGTCGATTGTGGTTTCACGAGGATGTACATGATGTTTTGACAAAAAATACTGGAACACAAACTGTTGAGGCACTGATCTTGAACATGCAAAGAACAGGCAGAGTTAGCTTTAGTACTAATGTTTTCCAAGACATGAAGAAACTGAGACTTTTACAACTTGATCGTGTTGACCTCATTGGGGATTTTGGCAATGTTAAACAAGTTTGGAAGGATGCCAAGTTGTTGCCAAAGCTAAAAACTCTCAATCTCAGTCATTCCAACTGTTCAAAACTTAGATGTGTGTTGGTAAAGTTTAAGTCAGAGATTCAACTGAAACGAGAATTGAGAAGATTTCTTGATGATCTTGTTGAGTTGGAAATATCACATTCATCACAAATCCCAGATCTTTCCTTGAAATCTATTTTGATTGGAATGGGAAGTTGCCACATAGTCAACGAGACTCTTAGAAAGAGCTTATCACAGCATATGTTCATGATACAGGGACTGTCAACTAATGATTCAATGGCTTCTTTCCTTCCGGGCAACAATTATCCTTCTTGGTTTGCCTATACATGTGAAGGGCCATCAGTATATTTTCAAGTGCCTGAGGATAGTGTTTGTGGAATGAAGGGAATAACTTTATGTGTTGTTTATTCATCAACACTTGGAAACACGGCAACTGAATGTCTCACTAGTGTTTTGATTGTTAATTACACAAAATTCACTATTCAGATATACAAGAGAGACACAACAATCTCCTTTAATGATGAAGATTGGAAGGATATAGTATCAAGATTAAGTGTCGGTGACAATGTAGAGATTTTTGTAGCCTTTGCGCATGGATTGATTGTTAAGGAGACGGCTGTCTATCTAATATATGACCAGTCAAATGCTATAGAAGTTGATGATGATGTTGATGCTAAGAGTAAAGGTGATCCTTCGAGGTGTGATAATCAAAGGGATATGGATGAAGCAAGTAAAACACACGGGGAAATTCTGAATAAATCAGAGGATGCTGGTGAGAAAGGGGCTTTGGTGAATGATGTTGATATCAACAAAAGGGTGGTTGAGCAAATTCCATATGTTGCTGCTGAAAGCCTCTTTAACAGGTTGGCCTCTGCAGCCTTTCGTGAATATGGACGAATTTATGGTGTTATGAATGAGTTGGAAAGGCTTAAGAACTCTGTTGAATGCATACAAGTTATGCTCCCTGATGCCCAGAAGAAACAGGAACAAGATTGTGTTGTACAACATTGGATAACAAGCCTCAAGGATGTGCTTCATCTTACAGATGACTTGTTTGATGAATTTATTATTGATGGTATGAGATACAAAGTGGATGCAGATGATAAGGACCAAGTGGCATGGGTTCACTCATCTTCTTCAAGCCACAATTTTCTACACCAGAAAATTGCTCCTGAAATTGAAAAAATACAACAAAAGTTTGATGATGTGCTAGAAGAAATGGCTAAGTTGAAATTAAGCCCAAAAGCTGTGGTGGTTCAGCAAACTGACAGTTTAAGGAGCAAATCTAATTCTTTTTTGTTAGAATCTGATATCACTGGCAGAGAAGATGATAAAGAGAAGATTATAAATCTCTTGAGGCAACCACATGGAAATATCTTGCCAATTGCCATTGAAGGGGAGGAATTGAATGGTGATGAATTGTCAGTTCTTTCAAAATTCAAACACTTACGTGTCTTGAAGCTGTCATATTGTTCTTTAAGCAAGTTGTCTAGTTCAATTGGAGAATTGAATCATTTAAGATATCTTAGCTTATCTCACTGTAGAGGACTGGGAAGTCTTTACGAATCTATTAACAGTCTTGTTTTGCTACAAACACTAATATTGACACCATTGGAAAAATTTGAGCTTTCTGCAGAGGTTGTATCAAAATTAATCAATTTAAGACACCTTCACATCTCTAATTGGAAAGCCTCCAGAGAAGAGACGCCATCTGAATTTGTAAAATTGAGCAATTTAAAATATGAGGGTATGATTTTTTCAAATTGGCTTTCTCCACTCACAAATATTGTTGAAATATCTTTCTTTTTGTGTGGAAATCTCCAGTATCTCCCACCGTTGGAGCATCTCCCATTCCTTAAGTCACTTCATATAAGTTTCCTTGAAGAACTGGAGTACATGTGTTATGAACAGGATTTTACTTCAGCATTCTTTCCGTCTTTGGAGAGCCTCTCTATGCAGTTTTGTGACAAGTTCAGGGGATGGTGGAGGATGGGAGATGATTTCAATAATTCTAACAGTTCACAAAAACTCTCCTTGCCTCCCTTTCCTCGTCTTTCTCAATTATCAATCATAGGATGCCAGATGTTGACTTGCATGCCTGCCTTTCCAAATCTTGAGAACAGATTGGAGTTGTACAATAGTTGTGTGGAAACCTTGGTAGCAACACTGAACACAGTAGCATTAGAAAGTTTGAATCACTCCCCTCCTCTTTCCAGGCTGAAATCCTTGCACATTGATGGAGTGAGCCTGGATGTGAAAAGAATCCCAAAGGATTGGATGCAAAATCTTACTTCTCTCCAGCTTCTTCAAATCAGTTGGTTTTCATGTCAAGCATTTCAGGAAATCAAAACTTGGTTTAAGGATGACCACAAGCGTCTTCCTTCTCTACAAACAATTGCCTTTCATAATTGTGAAGATCTAGAGGCATTGCCAGATTGGATATGCAGCCTCCCATCGCTTCAGCATCTTAGGGGAGGGGACACTTTTTATTCTTCTATCGGAACAAAGCAGTACGTCAGAGCTTTCCACGTGATTCTTGATGGTTTCATGCCTTGTGCAGTTGTGCTAAACAAATACGTACTGTGGTCCATGGAATTGTCTAGGCATTGTGAGGCAAGGAGAGGCGGAGGATCTTGTTCGGTGGAGATGAAATGCTCAAACTTTAAATTTATTGATGGTTTATTGGTGATTTTCTTTGCCTCGTTAGTCTTGTTGTGCTTGCTTGCACATAAAGAAGTGATTGTTTAA 3024 0.3856 MGREIVRESSASDPGKRSRLWFHEDVHDVLTKNTGTQTVEALILNMQRTGRVSFSTNVFQDMKKLRLLQLDRVDLIGDFGNVKQVWKDAKLLPKLKTLNLSHSNCSKLRCVLVKFKSEIQLKRELRRFLDDLVELEISHSSQIPDLSLKSILIGMGSCHIVNETLRKSLSQHMFMIQGLSTNDSMASFLPGNNYPSWFAYTCEGPSVYFQVPEDSVCGMKGITLCVVYSSTLGNTATECLTSVLIVNYTKFTIQIYKRDTTISFNDEDWKDIVSRLSVGDNVEIFVAFAHGLIVKETAVYLIYDQSNAIEVDDDVDAKSKGDPSRCDNQRDMDEASKTHGEILNKSEDAGEKGALVNDVDINKRVVEQIPYVAAESLFNRLASAAFREYGRIYGVMNELERLKNSVECIQVMLPDAQKKQEQDCVVQHWITSLKDVLHLTDDLFDEFIIDGMRYKVDADDKDQVAWVHSSSSSHNFLHQKIAPEIEKIQQKFDDVLEEMAKLKLSPKAVVVQQTDSLRSKSNSFLLESDITGREDDKEKIINLLRQPHGNILPIAIEGEELNGDELSVLSKFKHLRVLKLSYCSLSKLSSSIGELNHLRYLSLSHCRGLGSLYESINSLVLLQTLILTPLEKFELSAEVVSKLINLRHLHISNWKASREETPSEFVKLSNLKYEGMIFSNWLSPLTNIVEISFFLCGNLQYLPPLEHLPFLKSLHISFLEELEYMCYEQDFTSAFFPSLESLSMQFCDKFRGWWRMGDDFNNSNSSQKLSLPPFPRLSQLSIIGCQMLTCMPAFPNLENRLELYNSCVETLVATLNTVALESLNHSPPLSRLKSLHIDGVSLDVKRIPKDWMQNLTSLQLLQISWFSCQAFQEIKTWFKDDHKRLPSLQTIAFHNCEDLEALPDWICSLPSLQHLRGGDTFYSSIGTKQYVRAFHVILDGFMPCAVVLNKYVLWSMELSRHCEARRGGGSCSVEMKCSNFKFIDGLLVIFFASLVLLCLLAHKEVIV 1007
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00320 1007 Gene3D Ribonuclease Inhibitor 794 927 IPR032675 -
Trre15g00320 1007 Coils Coil 485 505 - -
Trre15g00320 1007 MobiDBLite consensus disorder prediction 314 337 - -
Trre15g00320 1007 Pfam Rx N-terminal domain 375 463 IPR041118 -
Trre15g00320 1007 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 519 673 - -
Trre15g00320 1007 SUPERFAMILY L domain-like 559 803 - -
Trre15g00320 1007 Gene3D - 373 507 - -
Trre15g00320 1007 Gene3D Ribonuclease Inhibitor 554 793 IPR032675 -
Trre15g00320 1007 SUPERFAMILY L domain-like 767 927 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00320 Trre-Chr15 2167955 2180038 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g00320 2 70 WRKY Transcription Factor Family AT4G12020 44.928 1.59e-09 60.5