Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00319 ATGGGAAGAGAAATTGTTCGCGAAAGTTCAGCAAGTGACCCAGGGAAGCGTAGTCGATTGTGGTTTCACGAGGATGTACATGATGTTTTGACAAAAAATACTGGAACACAAACTGTTGAGGCACTGATCTTGAACATGCAAAGAACAGGCAGAGTTAGCTTTAGTACTAATGTTTTCCAAGACATGAAGAAACTGAGACTTTTACAACTTGATCGTGTTGACCTCATTGGGGATTTTGGCAATGTTAAACAAGTTTGGAAGGATGCCAAGTTGTTGCCAAAGCTAAAAACTCTCAATCTCAGTCATTCCAACTGTTCAAAACTTAGATGTGTGTTGGTAAAGTTTAAGTCAGAGATTCAACTGAAACGAGAATTGAGAAGATTTCTTGATGATCTTGTTGAGTTGGAAATATCACATTCATCACAAATCCCAGATCTTTCCTTGAAATCTATTTTGATTGGAATGGGAAGTTGCCACATAGTCAACGAGACTCTTAGAAAGAGCTTATCACAGGGACTGTCAACTAATGATTCAATGGCTTCTTTCCTTCCGGGCAACAATTATCCTTCTTGGTTTGCCTATACATGTGAAGGGCCATCAGTATATTTTCAAGTGCCTGAGGATAGTGTTTGTGGAATGAAGGGAATAACTTTATGTGTTGTTTATTCATCAACACTTGGAAACACGGCAACTGAATGTCTCACTAGTGTTTTGATTGTTAATTACACAAAATTCACTATTCAGATATACAAGAGAGACACAACAATCTCCTTTAATGATGAAGATTGGAAGGATATAGTATCAAGATTAAGTGTCGGTGACAATGTAGAGATTTTTGTAGCCTTTGCGCATGGATTGATTGTTAAGGAGACGGCTGTCTATCTAATATATGACCAGTCAAATGCTATAGAAGTTGATGATGATGTTGATGCTAAGAGTAAAGGTGATCCTTCGAGGTGTGATAATCAAAGGGATATGGATGAAGCAAGTAAAACACACGGGGAAATTCTGAATAAATCAGAGGATGCTGGTGAGAAAGGGGCTTTGGTGAATGATGTTGATATCAACAAAAGGGTGGTTGAGCAAATTCCATATGTTGCTGCTGAAAGCCTCTTTAACAGGTTGGCCTCTGCAGCCTTTCGTGAATATGGACGAATTTATGGTGTTATGAATGAGTTGGAAAGGCTTAAGAACTCTGTTGAATGCATACAAGTTATGCTCCCTGATGCCCAGAAGAAACAGGAACAAGATTGTGTTGTACAACATTGGATAACAAGCCTCAAGGATGTGCTTCATCTTACAGATGACTTGTTTGATGAATTTATTATTGATGGTATGAGATACAAAGTGGATGCAGATGATAAGGACCAAGTGGCATGGGTTCACTCATCTTCTTCAAGCCACAATTTTCTACACCAGAAAATTGCTCCTGAAATTGAAAAAATACAACAAAAGTTTGATGATGTGCTAGAAGAAATGGCTAAGTTGAAATTAAGCCCAAAAGCTGTGGTGGTTCAGCAAACTGACAGTTTAAGGAGCAAATCTAATTCTTTTTTGTTAGAATCTGATATCACTGGCAGAGAAGATGATAAAGAGAAGATTATAAATCTCTTGAGGCAACCACATGGAAATATCTTGCCAATTGCCATTGAAGGGGAGGAATTGAATGGTGATGAATTGTCAGTTCTTTCAAAATTCAAACACTTACGTGTCTTGAAGCTGTCATATTGTTCTTTAAGCAAGTTGTCTAGTTCAATTGGAGAATTGAATCATTTAAGATATCTTAGCTTATCTCACTGTAGAGGACTGGGAAGTCTTTACGAATCTATTAACAGTCTTGTTTTGCTACAAACACTAATATTGACACCATTGGAAAAATTTGAGCTTTCTGCAGAGGTTGTATCAAAATTAATCAATTTAAGACACCTTCACATCTCTAATTGGAAAGCCTCCAGAGAAGAGACGCCATCTGAATTTGTAAAATTGAGCAATTTAAAATATGAGGGTATGATTTTTTCAAATTGGCTTTCTCCACTCACAAATATTGTTGAAATATCTTTCTTTTTGTGTGGAAATCTCCAGTATCTCCCACCGTTGGAGCATCTCCCATTCCTTAAGTCACTTCATATAAGTTTCCTTGAAGAACTGGAGTACATGTGTTATGAACAGGATTTTACTTCAGCATTCTTTCCGTCTTTGGAGAGCCTCTCTATGCAGTTTTGTGACAAGTTCAGGGGATGGTGGAGGATGGGAGATGATTTCAATAATTCTAACAGTTCACAAAAACTCTCCTTGCCTCCCTTTCCTCGTCTTTCTCAATTATCAATCATAGGATGCCAGATGTTGACTTGCATGCCTGCCTTTCCAAATCTTGAGAACAGATTGGAGTTGTACAATAGTTGTGTGGAAACCTTGGTAGCAACACTGAACACAGTAGCATTAGAAAGTTTGAATCACTCCCCTCCTCTTTCCAGGCTGAAATCCTTGCACATTGATGGAGTGAGCCTGGATGTGAAAAGAATCCCAAAGGATTGGATGCAAAATCTTACTTCTCTCCAGCTTCTTCAAATCAGTTGGTTTTCATGTCAAGCATTTCAGGAAATCAAAACTTGGTTTAAGGATGACCACAAGCGTCTTCCTTCTCTACAAACAATTGCCTTTCATAATTGTGAAGATCTAGAGGCATTGCCAGATTGGATATGCAGCCTCCCATCGCTTCAGCATCTTAGGGGAGGGGACACTTTTTATTCTTCTATCGGAACAAAGCAGTACGTCAGAGCTTTCCACGTGATTCTTGATGGTTTCATGCCTTGTGCAGTTGTGCTAAACAAATACGTACTGTGGTCCATGGAATTGTCTAGGCATTGTGAGGCAAGGAGAGGCGGAGGATCTTGTTCGGTGGAGATGAAATGCTCAAACTTTAAATTTATTGATGGTTTATTGGTGATTTTCTTTGCCTCGTTAGTCTTGTTGTGCTTGCTTGCACATAAAGAAGTGATTGTTTAA 3006 0.3859 MGREIVRESSASDPGKRSRLWFHEDVHDVLTKNTGTQTVEALILNMQRTGRVSFSTNVFQDMKKLRLLQLDRVDLIGDFGNVKQVWKDAKLLPKLKTLNLSHSNCSKLRCVLVKFKSEIQLKRELRRFLDDLVELEISHSSQIPDLSLKSILIGMGSCHIVNETLRKSLSQGLSTNDSMASFLPGNNYPSWFAYTCEGPSVYFQVPEDSVCGMKGITLCVVYSSTLGNTATECLTSVLIVNYTKFTIQIYKRDTTISFNDEDWKDIVSRLSVGDNVEIFVAFAHGLIVKETAVYLIYDQSNAIEVDDDVDAKSKGDPSRCDNQRDMDEASKTHGEILNKSEDAGEKGALVNDVDINKRVVEQIPYVAAESLFNRLASAAFREYGRIYGVMNELERLKNSVECIQVMLPDAQKKQEQDCVVQHWITSLKDVLHLTDDLFDEFIIDGMRYKVDADDKDQVAWVHSSSSSHNFLHQKIAPEIEKIQQKFDDVLEEMAKLKLSPKAVVVQQTDSLRSKSNSFLLESDITGREDDKEKIINLLRQPHGNILPIAIEGEELNGDELSVLSKFKHLRVLKLSYCSLSKLSSSIGELNHLRYLSLSHCRGLGSLYESINSLVLLQTLILTPLEKFELSAEVVSKLINLRHLHISNWKASREETPSEFVKLSNLKYEGMIFSNWLSPLTNIVEISFFLCGNLQYLPPLEHLPFLKSLHISFLEELEYMCYEQDFTSAFFPSLESLSMQFCDKFRGWWRMGDDFNNSNSSQKLSLPPFPRLSQLSIIGCQMLTCMPAFPNLENRLELYNSCVETLVATLNTVALESLNHSPPLSRLKSLHIDGVSLDVKRIPKDWMQNLTSLQLLQISWFSCQAFQEIKTWFKDDHKRLPSLQTIAFHNCEDLEALPDWICSLPSLQHLRGGDTFYSSIGTKQYVRAFHVILDGFMPCAVVLNKYVLWSMELSRHCEARRGGGSCSVEMKCSNFKFIDGLLVIFFASLVLLCLLAHKEVIV 1001
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00319 1001 SUPERFAMILY L domain-like 42 796 - -
Trre15g00319 1001 SUPERFAMILY L domain-like 761 921 - -
Trre15g00319 1001 Coils Coil 479 499 - -
Trre15g00319 1001 MobiDBLite consensus disorder prediction 308 331 - -
Trre15g00319 1001 Pfam Rx N-terminal domain 369 456 IPR041118 -
Trre15g00319 1001 Gene3D - 367 487 - -
Trre15g00319 1001 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 513 667 - -
Trre15g00319 1001 Gene3D Ribonuclease Inhibitor 791 920 IPR032675 -
Trre15g00319 1001 Gene3D Ribonuclease Inhibitor 548 790 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00319 Trre-Chr15 2167955 2180038 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g00319 2 70 WRKY Transcription Factor Family AT4G12020 44.928 1.66e-09 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00319 - - tpra:123923837 604.749