Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00318 ATGGGTGGATCGGGCAAAACATTAATAGCAAAAGCTATCTACAACAAACTTCATTGCGAATTTGACAATCACAGTTTCATTAAGAATGTTAGAGATGTCTGTAACATAGGTGATGGTTCTGATAAAGGGATTGAAGAATTACAAGAGTGTATTCTTAAAGAGCTCCAGAAAACGGATGAGAAAATATTCGGCAATGCATTGAAAACAATTAAGCAAATATGTAAGAGTAAAAGGGTACTCATTGTACTCGATGACGTGAGCACAGTTAAGCAAGTAGAACACCTATGTGGTGCTCGTAACTATTTTGGTCCTGGAAGTGTTTTGATTGTTACATCCAGGGATGCACACATATTTAACTCACTTAAATTTGACCATGTCTATAACATAAAGGAAATGGACAAAAATAATTCCCTTGAGCTCTTCAGTTGGCATGCATTTAAACAAGCAAGTCCATTGGAAGACTTCAAAGAACTCTCAGAAAGCATAGCTGATTACTGTGGAGGATTACCCCTGGCTCTTGAAGTCATTGGATCTTCCTTAAATGGTAGGGGGAAAAAATTCTGGGAAAAAATACCATCATATTTAAAGAGAGTTCCCAATAAGGAAGTGCAAAAGAGACTGAAAATAAGCTTTGATGGTTTAGATGAAAAATTCGAAAGGAATATATTTCTTGACATTTGTTGTTTCTTTATTGGGAAGGACAGAGCCTATGTTACAGATATACTAAATGGCTGTGGACTTTATGCTGATAATGGAATAGCCGTCCTCATAGAGCGGAGCCTTCTTAGAGTTGAAAATAATAACAAACTTGAAATGCATGATTTACTACGAGACATGGGAAGAAAATTTGTTGAAGAATCAGCAAAAAAGCTTGGGAAGCGTAGCCGATTGTGGTTTCAAGAGGATGTACATGATGTTTTGAAGGAAAATAGCGGAACTACCTGTGTGGAAGGATTGGTTTTGAAGTCGCAAAGCAACAAAAAGGTCTTCGAGACTGATTCTTTCATGGGGATGAAGAATTTGAGACTTTTGCAACTTGATCATGTTGATCTTACTGGAGATTATGTGCACCTTTCTCAAGAACTGAGATGGCTCTGTTGGCCGGGATTCAAAGACGACTGTATACCTGACAACTTTTGTCAGCTAAAACTAGTTGCTTTTGAGTTAGAACACAGCAATATTAAACATGTTTGGAATGAAACCAAGTCGATGCAGGACCTGAAAATTCTCAATCTCAGTTATTCCAAGCACTTGACACACACTCCTGACTTTTCCAAATTACCAAATCTCGAAAAGCTCATTATGAATGACTGTTCAAGCTTGTCTCAGTTACACCACTCGATTGGGGATCTCAAGAAGATTCTACTTATAAATTTGAAGGACTGTACAAGTCTTAGCAATCTCCCAGAGGAGGTCTATCAGTTGGCATCATTGGAAACTCTCATCCTTTCTGGTTGTTCAAATATTGACCAGTTAGAAGGAGACATGGAACAGATGAAACCCTGGACAAACGGTACAGGAGTGAAAGAGATTCTGTATTCAATACAAGGATTGAAAACGATCACATACGAGAATCGGAATGTCAACAATACTAGGATTGAATTATCATTTGAAGTTTTTCCAACTGCCAAATGGTCTCGAACTGTGAAACCACGGATTTTCCTAATTGATAACCTATATGATATAAGTTTTAGAGAACCAGAAACATCACAAAACTCAAACCTTTCCTTGAGATCACTTTTGATTGGAACTGGAAGTTGCCAAATAGTCATTGATACTCTTAGCAAGAGCATATCACAGGGATTAACAAGCAATGATTCAAGCCATTTTTCTCTTGCCGGTGACAATTCTTCTTGGTTAGCATATACAAGTAAAGGACCATCAGTACGATTTAAAGTTCCTGAGAATATTGATTGTCACGAGATGGCAATATGTGTTGCTTATTCATCAACACCTGAAAACATGCGAGCTGAGTGTCTTACCACTGTCTTGATCATTAATTACAAAAAGTCCACAGTTCACATATATAAGCGAGATGCTCTTAATTATGAAGATTGGAAGGGTTTAACCTCAAACCTTGAACCTCATGATGATGTGGAGATTTTTGTAGATTTTAGGCATGGATTGATTGTCAAGCAGACAGCTATCTATCTAATTTATGGCCAGTCAACTACTATGGAATTTGAAAAATCAATTATTATTAAGGAAGTCGAGCCATCAACTAACATGAACATAGACATTCCTGAAAATAGATTAGAAGATCATATTCCACCTTCAGCTCCTCCACTCTCTCCTGAAGGAAATGAGTCGGCCATTGAAGTGTTTGAGCAATCATTTACCGAAGAAACTACTGTTGTGGAAGTTGAGCTTTCAAAGTCTGCATCTCTTATTCTGGAACATGAAGCTCCAACTGTTGGGTATACTGAAGTTGGATCATCATCTACTGCTCCTCCACATGCATTTGTGACTCAGGAAGCATTTGACTCGTATGTGGCATCCAATAATGCAATAAATGAAGCCAATACCGAGCAAGTTGACACAATAATAGCCACACAACTCCAGATGCAGCAAACCCAACTCCAGATGCAGCTGACCCTTCAGCTTATCCTAGAGAAACTTACCAAATCCTAG 2631 0.3808 MGGSGKTLIAKAIYNKLHCEFDNHSFIKNVRDVCNIGDGSDKGIEELQECILKELQKTDEKIFGNALKTIKQICKSKRVLIVLDDVSTVKQVEHLCGARNYFGPGSVLIVTSRDAHIFNSLKFDHVYNIKEMDKNNSLELFSWHAFKQASPLEDFKELSESIADYCGGLPLALEVIGSSLNGRGKKFWEKIPSYLKRVPNKEVQKRLKISFDGLDEKFERNIFLDICCFFIGKDRAYVTDILNGCGLYADNGIAVLIERSLLRVENNNKLEMHDLLRDMGRKFVEESAKKLGKRSRLWFQEDVHDVLKENSGTTCVEGLVLKSQSNKKVFETDSFMGMKNLRLLQLDHVDLTGDYVHLSQELRWLCWPGFKDDCIPDNFCQLKLVAFELEHSNIKHVWNETKSMQDLKILNLSYSKHLTHTPDFSKLPNLEKLIMNDCSSLSQLHHSIGDLKKILLINLKDCTSLSNLPEEVYQLASLETLILSGCSNIDQLEGDMEQMKPWTNGTGVKEILYSIQGLKTITYENRNVNNTRIELSFEVFPTAKWSRTVKPRIFLIDNLYDISFREPETSQNSNLSLRSLLIGTGSCQIVIDTLSKSISQGLTSNDSSHFSLAGDNSSWLAYTSKGPSVRFKVPENIDCHEMAICVAYSSTPENMRAECLTTVLIINYKKSTVHIYKRDALNYEDWKGLTSNLEPHDDVEIFVDFRHGLIVKQTAIYLIYGQSTTMEFEKSIIIKEVEPSTNMNIDIPENRLEDHIPPSAPPLSPEGNESAIEVFEQSFTEETTVVEVELSKSASLILEHEAPTVGYTEVGSSSTAPPHAFVTQEAFDSYVASNNAINEANTEQVDTIIATQLQMQQTQLQMQLTLQLILEKLTKS 876
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00318 876 Gene3D - 1 126 IPR027417 -
Trre15g00318 876 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 226 IPR027417 -
Trre15g00318 876 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 519 IPR044974 GO:0006952
Trre15g00318 876 SUPERFAMILY "Winged helix" DNA-binding domain 202 308 IPR036390 -
Trre15g00318 876 Pfam NB-ARC domain 1 204 IPR002182 GO:0043531
Trre15g00318 876 SUPERFAMILY L domain-like 329 499 - -
Trre15g00318 876 Gene3D Ribonuclease Inhibitor 302 502 IPR032675 -
Trre15g00318 876 PRINTS Disease resistance protein signature 473 489 - -
Trre15g00318 876 PRINTS Disease resistance protein signature 73 87 - -
Trre15g00318 876 PRINTS Disease resistance protein signature 166 180 - -
Trre15g00318 876 Gene3D - 131 215 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00318 Trre-Chr15 2161058 2165457 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g00318 1 522 WRKY Transcription Factor Family AT5G45050 31.387 2.63e-66 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00318 - - mtr:25501054 798.89