Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00291 ATGGCTTCCTCTCTACTTCTTCCCTTTCTGCTCTACTCACTGATAATCCAATCCATCTGTGTTGTAGCTCAAACCAAAAGTACCATAGCTATTGGTGATTCTTTTACTGCAACAACCAGCACCTCTCCATGGTTGCTTTCACCTTCTGGTGACTTTGCCTTTGGTTTTCTTCCGCTTAAAAACACTACTGATATTTTTTTTCTTTCCATTTGGTATGCAAAAATTTTAGACAAAACTGTTGTGTGGTATGCTAATGGAGACAGTCCTGCACCACAAGGATCAAAAGTGGAACTCACTGCCAATGATGGGTTGGTGCTAACTTCTCCAAATGGTGACGGGTTATGGAATACTACTGAGGTAATCAGCGATGGAGTTATCCGCGGTGTGCTCAATGACACTGGCAACTTTGTGCTTGAGAATGCAAATTCCAAAAGTGTTTGGGAGACTTTCAAGTTTCCTAGTGACACCTTGTTGCCTTCTCAGGTTGTTGAAAAAGGTGGAAACCTTTCTTCAAGGCTTAAGGAGACAAATTTCAGTAAAGGAAGGTTTGAGCTTCTTTTACAAGGTAATGGTGATCTTGTTATGCGCTCTATTAATTTACCATCTGGCTATGTTAATAAAGAAGCCTACTATCTTAGTAATACTACAGGAGAAACTACATCAAGTGCTGGAACTCAATTGGTCTTTGACAGATCAGGGTACTTGTATATCTTGGGAGAGAAGAGTGAGAAATTCAATTTGTCAGAAGTAGAGAGTAATGTCTCTACCACTGATTTTTATCTTAGAGCAACTCTTAATTTTGATGGAGTGTTCATACTTTACAAACATCCAAAGAGTTCAACTGAGACTCAAGGTTGGACCACAGTGTGGTCTCAACCTGATAATATATGTAGTTATGTTGCTAGTAAAGGTAGTGGTGTTTGTGGATACAATAGCTTCTGCACTTTGGGAGATGATAAGAGGCCAACATGTCAGTGTCCAAATAGTTACTCGCTTGTTGATCCTGATGATCCATATGGTAGCTGCAAGCCAGACTTCATACAAGGATGTGCAGAAGATGAACTAAGTAAAAATAGAAATGATCTCTATGACTTTAAGACTTTGAATAACACTGATTGGCCTGAATCAGATTTTGTGCTTCAACAGCCTTTTACCGAAGAACAATGTAAGGAAGCTTGTCTGGAAGATTGCTTGTGTTCTGTGGCTATTTTCAGGTTTGGTAATAGTTGTTGGAAGAAGAAGTTACCACTCGCAAATGGGAGATTTGATGTGACACGTGGTTCTAAGGCCTTCTTGAAAGTGAGAAAAGATAAAACCTCCCTTGTGATCAAGAATAATAATAGAAAAACTTTGGTTTTAGTTGGTTCTGTGCTTTTTGGTAGCTCTGCTATTCTCAATATTGTATTGATTGTAGCAACTTGTGTCAGCACCTCCATTTTTCAGTTCAAGAAGAAGCTTAGGAGAGTTATCAAAAGTGATACGTGTGTTGAAATAGAATCCAATTTGCGTTGCTTCACTTACGAAGAGCTTGAAGAAGCTACCAATGGATTCGAGAAAGAGCTTGGAAGGGGAGCTTTTGGTATTGTTTATGAAGGAATCATCAACAACAACACATGTTCTGAAACTCGCGTGGCAGTGAAAAAGTTGAACAGTTTTTTGTTGGATCAAGCTCATAGGGAATTCAGGAATGAACTGAGTTCCATTGGTCTCACTCATCACAAGAACTTGGTTCGTTTACTTGGATTTTGTGAGTGTGGAAGTGAACGATTGCTTGTTTATGAGTACATGAGCAATGGAACTTTGGCAAATTTTCTTTTCAATTCTGATGAGAAACATAAACCAAGTTGGAAATTAAGGCTAGAAATTGCAATAGAGATAGCTCGAGGACTTGTGTATTTACATGAAGAGTGCATCACTAGGATCATCCATTGTGACATAAAGCCTCAAAACATACTCCTCGACGATTACTTCAATGCAAGAATATCTGACTTTGGATTGGCCAAGTTGTTGAACATGAATCAAAGCTAA 2028 0.3886 MASSLLLPFLLYSLIIQSICVVAQTKSTIAIGDSFTATTSTSPWLLSPSGDFAFGFLPLKNTTDIFFLSIWYAKILDKTVVWYANGDSPAPQGSKVELTANDGLVLTSPNGDGLWNTTEVISDGVIRGVLNDTGNFVLENANSKSVWETFKFPSDTLLPSQVVEKGGNLSSRLKETNFSKGRFELLLQGNGDLVMRSINLPSGYVNKEAYYLSNTTGETTSSAGTQLVFDRSGYLYILGEKSEKFNLSEVESNVSTTDFYLRATLNFDGVFILYKHPKSSTETQGWTTVWSQPDNICSYVASKGSGVCGYNSFCTLGDDKRPTCQCPNSYSLVDPDDPYGSCKPDFIQGCAEDELSKNRNDLYDFKTLNNTDWPESDFVLQQPFTEEQCKEACLEDCLCSVAIFRFGNSCWKKKLPLANGRFDVTRGSKAFLKVRKDKTSLVIKNNNRKTLVLVGSVLFGSSAILNIVLIVATCVSTSIFQFKKKLRRVIKSDTCVEIESNLRCFTYEELEEATNGFEKELGRGAFGIVYEGIINNNTCSETRVAVKKLNSFLLDQAHREFRNELSSIGLTHHKNLVRLLGFCECGSERLLVYEYMSNGTLANFLFNSDEKHKPSWKLRLEIAIEIARGLVYLHEECITRIIHCDIKPQNILLDDYFNARISDFGLAKLLNMNQS 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00291 675 Gene3D - 154 294 IPR036426 -
Trre15g00291 675 SMART blect_4 36 153 IPR001480 -
Trre15g00291 675 Gene3D - 21 152 IPR036426 -
Trre15g00291 675 Pfam D-mannose binding lectin 79 163 IPR001480 -
Trre15g00291 675 ProSiteProfiles Bulb-type lectin domain profile. 37 151 IPR001480 -
Trre15g00291 675 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 35 675 - -
Trre15g00291 675 FunFam Serine/threonine-protein kinase 154 300 - -
Trre15g00291 675 ProSitePatterns Serine/Threonine protein kinases active-site signature. 641 653 IPR008271 GO:0004672|GO:0006468
Trre15g00291 675 SUPERFAMILY alpha-D-mannose-specific plant lectins 66 196 IPR036426 -
Trre15g00291 675 ProSitePatterns Protein kinases ATP-binding region signature. 521 548 IPR017441 GO:0005524
Trre15g00291 675 FunFam S-receptor-like serine/threonine-protein kinase 484 595 - -
Trre15g00291 675 SMART serkin_6 515 674 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre15g00291 675 FunFam Os07g0541700 protein 596 675 - -
Trre15g00291 675 ProSiteProfiles Protein kinase domain profile. 515 675 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre15g00291 675 Gene3D Phosphorylase Kinase; domain 1 477 595 - -
Trre15g00291 675 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase LECRK1 23 151 - -
Trre15g00291 675 Pfam Protein tyrosine and serine/threonine kinase 517 671 IPR001245 GO:0004672|GO:0006468
Trre15g00291 675 CDD B_lectin 45 153 IPR001480 -
Trre15g00291 675 Gene3D Transferase(Phosphotransferase) domain 1 596 675 - -
Trre15g00291 675 SUPERFAMILY Protein kinase-like (PK-like) 495 674 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00291 Trre-Chr15 2002816 2004843 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g00291 471 675 Receptor kinase-like Gene Family AT2G23950 46.047 8.18e-46 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Trre15g00291 PK_Tyr_Ser-Thr 9.5e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00291 - - gmx:100815462 894.804