Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00256 ATGAGTGGGGGATCACACGAAGAAGGACCCGATTTGAAATTTACTCCGACATGGGTTGTTGCCCTCGTTTGCACCATCTTCCTCTTCGTTTCCTACGGCATTGTACGTTCTCTTCATTATTTTGGCAAGTATCTTTTGAAGAAAGAGCAGAAACCACTCTATCAAGCATTGCAAAAAATCAAACAAGAGTTTATGCTGGTGGGTTTTATGTCATTGTTTTTAACTGTGACACAAAATGGGATCACAAAAATCTGTATTCCAAAAAGTTTGTATCGTCATATGCTTCCTTGTGGACTTGACGAAAAGAAAAGTGAAGAAGAACATTTTTCAAAACCACCACCCACTTCACATTTTCAGACTTATTTCTCTTCCAACAACGATGTTCTCGACAATGCTAGGCTCCTTCTCGACATTGACACCGATGGTCGTCTTCCATTCTTAGAAGAAATACCTGGATATTGTGCTGCCAAGGGCAAGCTGCCTCTATTATCTGTGGATGCACTGCATCACCTGCATGTCTTTATTTTTGTCCAAGCTGTTACTCATGTGGCCTTATGTATTTTGACTATTGGTTTTGTAGGATTAATTATTCGTCGTTGGGAGCGCTGGGAAGAGTCTGTTACAAACGAAGACAATGAATCACAAGAAAGGACAATAGCTCATGCTCATCATCGCGAATTTATAAAAGATCGTGGAAAACATTCTTCTTTCATGGGATGGTTGAAATCATTTTTCAAGCAATTTTATGGATCTGTGACACAGTTGGATTATGTTGCATTAAGACATGGTTTCATTATGACTCATTGTAGGGGACATCCAAAGTTTAATTTTCATAAGTATGTCAACCGTGCACTTGAAGATGATTTCAAGAGAATTGTTGGCATTAATTGGTATCTTTGGTTCTTTGTGGTCATGTTTTTGTTGCTTAATATCAATGGTTGGCACACATATTTTTGGATTTCTTTCATTCCTTTCCTTCTTCTATTTGCTGTTGGAACTAAGCTGGAACATGTAATAATTCAATTAGCAAATGAAGTAGCTGATAAAAATTCACAACAATGTGGATTAATTGTTCAACCATCAGATGATCACTTCTGGTTTCATCGTCCTCGCATCGTCCTCTACTTGATTCACTTGATTCTTTTCCAAAATTCTTTTGAGATAGCATATTTTTTCTGGATACTGGTAACATATGGCCCTGATACATGTATAATGGGACAATTTACTTACATTCTTCTAAGGCTCATTATTGGGGCATTAATTCAGATACTATGTAGTTTTAGTATCCTACCACTATATGCAATTGTTACTCAGATGGGAACTCACTTTAAGAATGTGATATTTAATGAGCAAATACAAGAAAAACTAATTGGTTGGGCACAAAAGGCAAAGAGGAGAGCAAGTGATAATCATCATGCCCAATCCTCTGTCGAAGCAAGTCCTCATCATCATAATGGTGCAAGTCAATCTGGGGATGAAAGTCCTTATACTGGTACAAATACAAATTCAAGTTCAAGTGTTATCATTGAGCTAGGGACAGGGTCAGTGTCTAGAAGGGCACCTGACCTAGAAGATGACAACAATATTGTCCCTAGTAATGAAGAAAACGTATGA 1614 0.3767 MSGGSHEEGPDLKFTPTWVVALVCTIFLFVSYGIVRSLHYFGKYLLKKEQKPLYQALQKIKQEFMLVGFMSLFLTVTQNGITKICIPKSLYRHMLPCGLDEKKSEEEHFSKPPPTSHFQTYFSSNNDVLDNARLLLDIDTDGRLPFLEEIPGYCAAKGKLPLLSVDALHHLHVFIFVQAVTHVALCILTIGFVGLIIRRWERWEESVTNEDNESQERTIAHAHHREFIKDRGKHSSFMGWLKSFFKQFYGSVTQLDYVALRHGFIMTHCRGHPKFNFHKYVNRALEDDFKRIVGINWYLWFFVVMFLLLNINGWHTYFWISFIPFLLLFAVGTKLEHVIIQLANEVADKNSQQCGLIVQPSDDHFWFHRPRIVLYLIHLILFQNSFEIAYFFWILVTYGPDTCIMGQFTYILLRLIIGALIQILCSFSILPLYAIVTQMGTHFKNVIFNEQIQEKLIGWAQKAKRRASDNHHAQSSVEASPHHHNGASQSGDESPYTGTNTNSSSSVIIELGTGSVSRRAPDLEDDNNIVPSNEENV 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00256 537 Pfam Mlo family 11 483 IPR004326 GO:0006952|GO:0016020
Trre15g00256 537 MobiDBLite consensus disorder prediction 479 512 - -
Trre15g00256 537 PANTHER MLO-LIKE PROTEIN 1 11 502 IPR004326 GO:0006952|GO:0016020
Trre15g00256 537 MobiDBLite consensus disorder prediction 470 537 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00256 Trre-Chr15 1764641 1768188 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g00256 4 481 MLO family AT4G02600 55.781 0.0 552
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00256 K08472 - gmx:100811793 612.838