Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trre15g00216 | ATGGGAGTAGGAAGAGAAATCCTGAAGGAAAAAAGCGATCTTGAGATTGCTGTGAGTGAAAAAAGAAGAAAGCCTGGGTATCGTGTGACTAAGCAAATTGATCCTTATACTAAGCAAAGATCTCTTCTTTTTAAGTTTGATTATCCTGAGATTGAAGGCATCGCAAAGCCTAGGCATCGATTTATATCCTCCTATGAGCAGAGGGTGCAACCATTTGATAAAAGATACCAGTATCTCTTGTTTGCAGCTGAACCTTATGAAACAATTTCTTTCAAGGTACCGAGCACAGAGCACGTCTGCTCTAAAGTTTTTCTCGCCGTCAATTTCCGGGTTGAGGGACTTCATCCAACCCAACGTGGTCAAAGGAATGGTTCTCTTGAACCAAAACGATGTTTTGATGGTTTAGCTATGAATAATGTTGGAATATGA | 429 | 0.4033 | MGVGREILKEKSDLEIAVSEKRRKPGYRVTKQIDPYTKQRSLLFKFDYPEIEGIAKPRHRFISSYEQRVQPFDKRYQYLLFAAEPYETISFKVPSTEHVCSKVFLAVNFRVEGLHPTQRGQRNGSLEPKRCFDGLAMNNVGI | 142 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trre15g00216 | 142 | SMART | CactinC_cactus_3 | 11 | 118 | - | - | |
Trre15g00216 | 142 | Pfam | Pre-mRNA-splicing factor SF3a complex subunit 2 (Prp11) | 24 | 99 | IPR031781 | - | |
Trre15g00216 | 142 | Gene3D | - | 5 | 106 | - | - | |
Trre15g00216 | 142 | PANTHER | SPLICING FACTOR 3A SUBUNIT 2 | 9 | 98 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trre15g00216 | Trre-Chr15 | 1480922 | 1483662 | Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trre15g00216 | 11 | 97 | C2H2 Transcription Factor Family | AT2G32600 | 67.816 | 8.16e-36 | 122 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trre15g00216 | K12826 | - | cave:132161723 | 137.117 |