Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00156 ATGGAAGATTTGTGGGAAAAGTGGATTTCTTCTTTGGAAATGAGTGGTGACAAATCTCCCTCTTTGGATGAAGACAAGTTTCTCATAGAGAATATTCAACAAAGTTTCCCTTTTGAGAATGCTAATAATTCTCAATCTTCAACCATACAATATTGCAATAATATTGTTGATAATGTTTGTGTCACCACCACAATTCATGATGAGAACATGCTCATGCTCAATAATAGTAATAATTCCAACTCTCTCATTTCTCAAGAATATCATGGTGCTACTAATTCACAACAATTAGCACCTTCTCAATTCATTTTGTCTTTTGAAAACACAAGTGTGGAACCTTCTCCTAATAGTGCCACATTTTCTACTATCATGGAACAAAAAACATCATTGGATAATAATGTGAGTGAATTACCAAAGGTAAAACAGAGAACTAGAAGCTCTTCTGAGGTACAAGAACATATCATAGCTGAAAGAAAAAGGAGACAAGTTATTAGTGAGAGGTTCATAGCACTTTCTGCCATAATACCTGGATTGAAGAAGAAGCTGAACTTCAGAAGCTCTAGAGAGTCAAGAGTTTCTGGTAGTCAGTAG 588 0.3503 MEDLWEKWISSLEMSGDKSPSLDEDKFLIENIQQSFPFENANNSQSSTIQYCNNIVDNVCVTTTIHDENMLMLNNSNNSNSLISQEYHGATNSQQLAPSQFILSFENTSVEPSPNSATFSTIMEQKTSLDNNVSELPKVKQRTRSSSEVQEHIIAERKRRQVISERFIALSAIIPGLKKKLNFRSSRESRVSGSQ 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00156 195 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 147 195 IPR011598 GO:0046983
Trre15g00156 195 PANTHER BHLH TRANSCRIPTION FACTOR 22 179 - -
Trre15g00156 195 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 146 182 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00156 Trre-Chr15 1081440 1082707 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g00156 98 179 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G22750 45.055 4.56e-13 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00156 - - tpra:123883331 247.669