Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00155 ATGGCTTCTACTTCAAGGAGATTACCAACACCTCAAGAAAGAGAAAAATGGAAACACATTTTTGACACTATCATAGATCCAAATCTGGCACCAATTGAAATCCCTCAACCTTTTTTCCACAAAATGAAAGGTGAGTTTATAAAACACACATTTGGTTGGATCAGGGGTCCAAAAAAAATGAAAATCATGGTTAGATATCTCCAATCCAATAGTGGTATCAAGCTCTCCTCTGGAGTGTGTGTTTCTCGATATTTTGGATTTGTTATACCAACAAGGGTGACACTTAGCTATGTGATTGAAGAGAATACTTTTTGGATGAGAATTTACCCTCCACTTCAACCTGTGAAAACTGAATTTCCACCTCAGGCAACTTTGAAAAGGAAACATCAAAAGGAGATATTAGGCAATAATGATGATCAAGATGAGTCAAATTCCAATAGGTGCAAGAGACCTAAAGGCAACAAACAAGCTGTGTATTTGAAGTCCCCCCCTCCATGTCAAAAACAGAAAATTCTGAAGTCTACCCCAAAGGAATTAAGCAAACAACGACACCCAAATTTGAAGATTCGTGCATCTCAGAAAAAAAAAAGATTTGAAATCCACACCAAAGAAATCAAACAAACAACATCAGGTAAGAGACCAGCCATTGTAAAGCTGAATCCTGATGGAAGCTATGGTTGGGAGAAGATTGTAACTAGAGTTGGTGCAGCCGATGCAAGACCTCAAGTCATGCATTTTCCTAAGCAATTTTCTAGATTGTTTTTGGGAAAAAAACAAAACAAAGTGTTGGTCCAAGCTGAAGCAGGAGATACATTCTCTTGCAAGATTATGACAGCGACAAGGAATAGAGATGAAAAATACATATCAAAAGAGTGGACCAAATTTGTGAGAAGAAACAACCTTCAAGTTGGAGACAAGCTCATTTTCACTCTTCAAAACCAACCAACAAAACTCCTGATTCAGATCATCCATTGTAGTGTGCACGATTGA 990 0.3778 MASTSRRLPTPQEREKWKHIFDTIIDPNLAPIEIPQPFFHKMKGEFIKHTFGWIRGPKKMKIMVRYLQSNSGIKLSSGVCVSRYFGFVIPTRVTLSYVIEENTFWMRIYPPLQPVKTEFPPQATLKRKHQKEILGNNDDQDESNSNRCKRPKGNKQAVYLKSPPPCQKQKILKSTPKELSKQRHPNLKIRASQKKKRFEIHTKEIKQTTSGKRPAIVKLNPDGSYGWEKIVTRVGAADARPQVMHFPKQFSRLFLGKKQNKVLVQAEAGDTFSCKIMTATRNRDEKYISKEWTKFVRRNNLQVGDKLIFTLQNQPTKLLIQIIHCSVHD 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00155 329 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 131 324 IPR044837 -
Trre15g00155 329 SUPERFAMILY DNA-binding pseudobarrel domain 238 320 IPR015300 -
Trre15g00155 329 Gene3D - 164 327 IPR015300 -
Trre15g00155 329 SMART B3_2 230 326 IPR003340 GO:0003677
Trre15g00155 329 MobiDBLite consensus disorder prediction 125 149 - -
Trre15g00155 329 MobiDBLite consensus disorder prediction 125 161 - -
Trre15g00155 329 ProSiteProfiles B3 DNA-binding domain profile. 229 326 IPR003340 GO:0003677
Trre15g00155 329 CDD B3_DNA 244 323 IPR003340 GO:0003677
Trre15g00155 329 Pfam B3 DNA binding domain 244 323 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00155 Trre-Chr15 1065104 1066866 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Trre15g00155 B3 5.4e-10 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00155 - K15310 tpra:123904760 194.897