Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00147 ATGTCCTTCAATCAATCAAAAACCGAAAAGAACGACGCCGTTTATCGAAAATCTGGGCGATCGTCTAGCTTTAATCAGCAGAGAGGTCCCTCAGGTGCTTATGGAAGGGGCAGCGGCGGGCCTGCTCCGTCACTCTCCTCTAACAAGAGTTTTAACAAGAAGTCTAATAGTGCACAAGGTGGGCAATATAGGGTAAACCCTTCCCCAGTGAATTCAACAGAGTCAAACAATGCTCCTGCTGCTCGAGGCACACATAATGGTACTCACGTGCAATCACAATTGCATGGAGCATCTGATGGGCCGGTTGCAAAGGCATCCGAATCAACAGCACAGAGGAGCCCTAAAGTTGTTCCAAATGCACCAACTACTCAACTTCCCCCTGCTGTGAGCTCTGATACAACCGCTCCTACAAGCCCTGCTAAGGGAGATGCATCAAAGGCGTTCCCTTTTCAGTTTGGATCGATTGTCCCTGGCTTTATGAATGGGGTGGCAATTCCTCCTCGTACAAGCTCAGCTCCTCCTAATTTAGACGAGCAGAAGCATGCTCAGGCCCATCATGACTCTGTTAGATCTGCTGTGCCTTCAGTGCCAATACCTCCTGTTCCGAAGCAGCAGCAACCACCTAGGAATGATGCAGGTGTAACTGAGAAATCTAATGCCAGGGAGACTCATCTGGGGGCTAAGGCTAAAAAGGATCCCCAGGTGCCAGTTTTGACCCCAGCAAGCCAGATGCAGAAGCCTTCTGTTGTTCCTGTAACTGGGATTTCAATGTCAACACCATTTCAGCAGCAGTCACAGGCACCTTTACAGTTTGGCGGTCCTAATCCACAGATTCAATCTCAGGGGATGTCCTCGACACCCCTCCACATTCTACCGATGCCTATACCACTTGGAAATGTTCCACAAGTGCAACAGCCAGTTTTTGTTCCAGGTCTCCAGCCTCATCCGATGCACCCTCATGGGATCATGCATTCAGGCCATAACATAAGTTTCACTCATCAAATGGGCCATCAGTTGCCCCATCAATTGGGCATTGGCATGGGCCCTCAATATCCCCAGCAGCAGGGTGGAAAATTTGCCACTCCTCGAAAAGCTACTCCTGTCAAGATAACTCATCCTGATACACATGAAGAGCTGAGGCTTGATAAAAGGACAGATGGATATTCAGATGGGGGGTCATCTGGTGCTAGGTCGCATCCTAATGTACCTTCTCAATCTCAACCTGTTAAATCGATTGCCACTTCTCAGCCTACGAATTATTATCCTTCCAGCTCATATGGTTCCAGTTCTCCCTATTATCAACCTAATTCAATTCCATCAACAAATAGCCAAATAACTCCCAATGCTCAGCCACCAATATTTAATTATCCAGTGAACAATGGTCCACAAAATGTGGCTTTCATGAATTCGCCGTCTCTTAATTCTCAGCCTATTAATAAAGTCAGCACTCCTATTCCTCGCATTGCTGAACCCCCCACTGTAGAACGTTCTCGTGAAGTGCCTAATGTGATATTATCCGCTTCAACGGGGGTTGCATCTGTGATTATTAAACCAAGTGCCGTGTCTGCTGTTGCGGACTCATCATTGACTAATTCTAGTATATGTGGTGTTCAAAATACCGAGACTTCTAGTTCAGCAGCATCTTGCGATGCTAGCTCCCCTTTACCACAAAAAGGGTCTGAAACTTTCTCGGAAATCTCTACAGGAAAATCTAAATCTTCTGAAGATTCTTCAGTTTTGAGTTCATTGCCAAAGCAATCTGCTGCATCTGTTGTTGTCAGTGCTGAGAAGCTTACGATGCCACCTTTGTCAGCTGTGACTGTGGATTCTGTTTCAGTTGTGACTAATAATGAAGCCAACATGAGGGAACCTATTAACGGGTCCAACTCTTTAAAGGATAACCAGAAGAAACCTGGGAAAAAAGGTCAATCATCTCAAGATCAGGATACTGTGCAATCTCCTCGAATGGCGAATGTGCCGTCTGGAGCTGTTGAAAGTGGTATATCTGATACTAAGGTTTCCACACCTGTAGGAAGTGAAACAAACCATTCTCCTGCAATTATTGCTGCAGATCTTCCCATATCTGAAGGATCTATTGCTAAAGCGGCTGACAGTTTGAGTTATCATAAGCATGATAAGATAGATGAATCATCTGAAGATCTGCAGTCTGCTGATGTACCAGAAACAACAAAGGAAATTAATGACAGTTCAGAGAATGCTTGCAGCGACTCCGTGTCTCTTTCAGCTTCAGGTATGAAGGATAGACCAAGTTTAGAAGCAAATAAAGCAAAAGTTACATCTAAAGGGAAGAAGAAATGGAAAGAGATTCTCCAGAAAGCAGATGCCGCTGGGTCAACTTATGATCTTTATAATGCATACAAAGGACCCGAGGAAAAGAAAGAAACTGTCTTAATTTCAGAGAGCACAGAAAATGAATCTACATCTGAAGGTTTAAAGCAGTTATCTGCAGATTCTGCTCAGTTAGATTCTCCCGTAAGTGAGAAATGTGGTCACAATAAAGCTGAACCTGATGACTGGGAGGATGCAGCTGACATGTCTACACCAAAACTTGGAGTTGATGATAAATCTCAACAGGTTATTGATGGAATTGGAAGTACAGCAAAAAAGTATTCACGCGATTTTCTTTTGAAATTCGCAGAGCAATGCATTACTCTTCCTGAAGGTTTTGAAATTACGGCAGACATTGTTGACCCTTTGATGAGTTTCAATAATTCTCGTGATTCACATCCGAGTCCTGGAAGAAACGTAGACAGGTCAAGGATGGAACGCCGTGGGAATGTTGTGGCTGAGGAAGACAGATGGAATAAAGCTGCCAATGCTTTTCATTCTGGGCGTGGTTTGGATGGTATTGGTGGTAATGGCGGTCGGCACGGCCAAGGAAGAAATTTTGGTGTTTTAAGAAATCCCGGTGGACAGTTATCCCCCCAATTTACTGGGGGTATCCTTTCTGGACCAATGCAATCTGTGGGAAATCAGGGTGGAATGCAAAGAAATAGCCCTGACGGGGAGAGGTGGCAGCGTTCTACTAGCTTCCAGCAGAGGGGTTTAATTCCTTCACCTCAGTCTCCCTTACAGATGATGCACAGGGCCGAGAAAAAGTATGAAGTAGGTAAAGTCTCAGATGCGGAAGAGGCAAAGCAGAGGCAGCTGAAGGCTATCTTGAACAAACTAACTCCTCAGAATTTTGATAGACTTTTTGAACAGGTAAAAGCAGTTAATATTGACAATGCAGTCACTCTCACTGGTGTCATCTCACAAATCTTCGAGAAAGCTCTGATGGAGCCTACCTTCTGTGAAATGTATGCCAATTTCTGCTCCCATCTGGCTACTGAGTTGCCTGATTTGAGTGTGGACAATGAAAAGATAACTTTTAAAAGGTTATTATTAAACAAATGCCAGGAGGAATTTGAGAGGGGTGAAAGAGAACAAGAAGAGGCAAATAAGGCTGATGAGGGTGAGGTCAAGCTATCAAATGAAGAAAGGGAGCTGAGAAGAACCAAGGCAAGAAGGCGCATGTTAGGAAACATTAGATTGATTGGAGAACTATATAAGAAGAAAATGTTGACAGAGAGGATAATGCACGAGTGTATCAAAAAGTTACTAGGTCAGTGTCAGGATCCTGATGAGGAAGATGTTGAAGCTTTGTGCAAGCTGATGAGTACTATTGGGGAGATGATTGACCATCCCAAAGCCAAGGAACATATGGATGTATATTTTGAAAGGTTGAAAATATTATCAAACAACATGAATTTGTCTTCTAGGGTGAGGTTTATGTTGAAGGATGTAATTGATTTGAGAAGGAATAGATGGCAACAAAGGAGAAAAGTTGATGGTCCAAAGAAGATTGAGGAGGTACACAGGGATGCTGTGCAAGAGAGGCAGGCTCAAGCTCAAGTTGGTAGGATGGGTCGTGGTATGGGAAACAATCAATCTGCAAGAAGGAACCCCCCCATGGATTTTGGTGCTAGAGGATCATCTATGTTGTCTCCTCCTGCTCAGATGGGTGGACCGCGTGGGCTGCCTACACAAGCACGTGGATATGGTTTACAGGATGCTCGTTTTGAAGAAAGGCAATCTTATGAGCCTAGGCCCTTGTCAGTTAATTTTCCTCAAAGACCCTTGGGTAATGATTTATCATTGGTACCCCAAGGTGGTCTTGCTAGGGGAATGGTCATGAGAGGATCAACAATTTCTCATTTGTCAATACCTGATGTGCATTCTAGCCACGGAGACTCTCACAGAATGCCTGGCGGTATTAATGGTTATAGCAATTCATCTGAGCGCACACCGTATGGCTCAAGGGAGGATCTTGCATCAAGATATATTTCAGACAGATCTTCAAGTCTAGCTGGATATGATCATTCAAGTGCTCCAGGTCATAATATAAACTATGGTAACAGAGACTTAAGGAATGATGATCGAAATCTCGACAGGCCTGTTACAACTCCACCTCACACTCAGTTGCAAGGGCCAATTGTCTCCCAAAATGCTTCTTCAGAGAATGCTTTGCCAGAGGAACGACTACGGGACATGTCCTTGTCAACAATCAGAGAATACTACAGTGCTAGAGATGTAAATGAAGTTGCACAATGCATCAGAGATTTGAACTCTCCAGCCTTTCATCCTTCCATGGTTTCTGTATGGGTCATGGACTCATATGAGAGAAAGGACACTGAAAGAGATCTTTTGGCCAAACTGCTTGTCAAACTTGGCAAATCTCAGGATGGCCTATTAAGTCAAACTCAGCTTAACGAAGGGTTCGTGAAAGTTCTCTGTACATTGGAGGACGATGTTAATGATGCTCCCAGGGCACCAGAGTTTCTTGGTCGTATTTTTGCAGAACTTGTAACAGAGAGTATAGTCAGTTTGAATGAAATCGGCCAATTAATACATGATGGTGGAGAGGAGCCAGGCAGTCTCTTAGAATTTGGACTTGCAGCTGATGTTCTCGGAAGCACCTTGGAGGCAATAAAACATGAGAAAGGCGATGCTGTTCTAAGTGAGATTCAAACAAACTCAAACTTGCGGTTGGAAACTTTCCGACCACCGAATAATTCTACTACATCAAGGAAATTGGAGAAGTTTATTTAG 5112 0.4407 MSFNQSKTEKNDAVYRKSGRSSSFNQQRGPSGAYGRGSGGPAPSLSSNKSFNKKSNSAQGGQYRVNPSPVNSTESNNAPAARGTHNGTHVQSQLHGASDGPVAKASESTAQRSPKVVPNAPTTQLPPAVSSDTTAPTSPAKGDASKAFPFQFGSIVPGFMNGVAIPPRTSSAPPNLDEQKHAQAHHDSVRSAVPSVPIPPVPKQQQPPRNDAGVTEKSNARETHLGAKAKKDPQVPVLTPASQMQKPSVVPVTGISMSTPFQQQSQAPLQFGGPNPQIQSQGMSSTPLHILPMPIPLGNVPQVQQPVFVPGLQPHPMHPHGIMHSGHNISFTHQMGHQLPHQLGIGMGPQYPQQQGGKFATPRKATPVKITHPDTHEELRLDKRTDGYSDGGSSGARSHPNVPSQSQPVKSIATSQPTNYYPSSSYGSSSPYYQPNSIPSTNSQITPNAQPPIFNYPVNNGPQNVAFMNSPSLNSQPINKVSTPIPRIAEPPTVERSREVPNVILSASTGVASVIIKPSAVSAVADSSLTNSSICGVQNTETSSSAASCDASSPLPQKGSETFSEISTGKSKSSEDSSVLSSLPKQSAASVVVSAEKLTMPPLSAVTVDSVSVVTNNEANMREPINGSNSLKDNQKKPGKKGQSSQDQDTVQSPRMANVPSGAVESGISDTKVSTPVGSETNHSPAIIAADLPISEGSIAKAADSLSYHKHDKIDESSEDLQSADVPETTKEINDSSENACSDSVSLSASGMKDRPSLEANKAKVTSKGKKKWKEILQKADAAGSTYDLYNAYKGPEEKKETVLISESTENESTSEGLKQLSADSAQLDSPVSEKCGHNKAEPDDWEDAADMSTPKLGVDDKSQQVIDGIGSTAKKYSRDFLLKFAEQCITLPEGFEITADIVDPLMSFNNSRDSHPSPGRNVDRSRMERRGNVVAEEDRWNKAANAFHSGRGLDGIGGNGGRHGQGRNFGVLRNPGGQLSPQFTGGILSGPMQSVGNQGGMQRNSPDGERWQRSTSFQQRGLIPSPQSPLQMMHRAEKKYEVGKVSDAEEAKQRQLKAILNKLTPQNFDRLFEQVKAVNIDNAVTLTGVISQIFEKALMEPTFCEMYANFCSHLATELPDLSVDNEKITFKRLLLNKCQEEFERGEREQEEANKADEGEVKLSNEERELRRTKARRRMLGNIRLIGELYKKKMLTERIMHECIKKLLGQCQDPDEEDVEALCKLMSTIGEMIDHPKAKEHMDVYFERLKILSNNMNLSSRVRFMLKDVIDLRRNRWQQRRKVDGPKKIEEVHRDAVQERQAQAQVGRMGRGMGNNQSARRNPPMDFGARGSSMLSPPAQMGGPRGLPTQARGYGLQDARFEERQSYEPRPLSVNFPQRPLGNDLSLVPQGGLARGMVMRGSTISHLSIPDVHSSHGDSHRMPGGINGYSNSSERTPYGSREDLASRYISDRSSSLAGYDHSSAPGHNINYGNRDLRNDDRNLDRPVTTPPHTQLQGPIVSQNASSENALPEERLRDMSLSTIREYYSARDVNEVAQCIRDLNSPAFHPSMVSVWVMDSYERKDTERDLLAKLLVKLGKSQDGLLSQTQLNEGFVKVLCTLEDDVNDAPRAPEFLGRIFAELVTESIVSLNEIGQLIHDGGEEPGSLLEFGLAADVLGSTLEAIKHEKGDAVLSEIQTNSNLRLETFRPPNNSTTSRKLEKFI 1703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00147 1703 MobiDBLite consensus disorder prediction 1425 1439 - -
Trre15g00147 1703 MobiDBLite consensus disorder prediction 1411 1441 - -
Trre15g00147 1703 MobiDBLite consensus disorder prediction 713 764 - -
Trre15g00147 1703 MobiDBLite consensus disorder prediction 825 851 - -
Trre15g00147 1703 MobiDBLite consensus disorder prediction 617 683 - -
Trre15g00147 1703 SMART if4_15 1054 1276 IPR003890 GO:0003723|GO:0005515
Trre15g00147 1703 MobiDBLite consensus disorder prediction 543 583 - -
Trre15g00147 1703 SUPERFAMILY ARM repeat 1048 1278 IPR016024 -
Trre15g00147 1703 SMART ma3_7 1515 1629 IPR003891 -
Trre15g00147 1703 Gene3D - 1507 1703 - -
Trre15g00147 1703 MobiDBLite consensus disorder prediction 835 851 - -
Trre15g00147 1703 Pfam MIF4G domain 1054 1275 IPR003890 GO:0003723|GO:0005515
Trre15g00147 1703 MobiDBLite consensus disorder prediction 1487 1508 - -
Trre15g00147 1703 Gene3D - 1054 1289 - -
Trre15g00147 1703 MobiDBLite consensus disorder prediction 1 146 - -
Trre15g00147 1703 MobiDBLite consensus disorder prediction 997 1029 - -
Trre15g00147 1703 SUPERFAMILY ARM repeat 1508 1701 IPR016024 -
Trre15g00147 1703 Pfam MA3 domain 1519 1627 IPR003891 -
Trre15g00147 1703 MobiDBLite consensus disorder prediction 369 387 - -
Trre15g00147 1703 MobiDBLite consensus disorder prediction 644 682 - -
Trre15g00147 1703 MobiDBLite consensus disorder prediction 158 243 - -
Trre15g00147 1703 MobiDBLite consensus disorder prediction 1301 1321 - -
Trre15g00147 1703 FunFam Eukaryotic translation initiation factor 4G 1508 1702 - -
Trre15g00147 1703 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 347 1703 IPR045208 GO:0003743
Trre15g00147 1703 MobiDBLite consensus disorder prediction 351 450 - -
Trre15g00147 1703 MobiDBLite consensus disorder prediction 1455 1469 - -
Trre15g00147 1703 MobiDBLite consensus disorder prediction 1455 1508 - -
Trre15g00147 1703 MobiDBLite consensus disorder prediction 17 32 - -
Trre15g00147 1703 MobiDBLite consensus disorder prediction 723 751 - -
Trre15g00147 1703 FunFam Eukaryotic translation initiation factor 4G 1054 1289 - -
Trre15g00147 1703 Coils Coil 1136 1176 - -
Trre15g00147 1703 ProSiteProfiles MI domain profile. 1514 1638 IPR003891 -
Trre15g00147 1703 MobiDBLite consensus disorder prediction 617 633 - -
Trre15g00147 1703 MobiDBLite consensus disorder prediction 104 140 - -
Trre15g00147 1703 MobiDBLite consensus disorder prediction 391 450 - -
Trre15g00147 1703 MobiDBLite consensus disorder prediction 41 95 - -
Trre15g00147 1703 MobiDBLite consensus disorder prediction 215 229 - -
Trre15g00147 1703 MobiDBLite consensus disorder prediction 997 1027 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00147 Trre-Chr15 985155 994639 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g00147 720 1702 Eukaryotic Initiation Factors Gene Family AT3G60240 54.150 0.0 948
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00147 K03260 - gmx:100798562 2095.47