Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00116 ATGGAAGGAGAAAGAGATGTTCCTAATTATGAGCTCCAAGTTTCATTCACAAACACTCCCCAAGCTATCCATGAAATGGGTTTTGTTCAATTTGAAGAAAATCAAGTTCTTAGCTTCGTGTCACCCTCTACACAATCTCAACTTTCTCAATCTCTAAATTCCGGCGGTAGCACCACCAACGTCCCTACCGGTGCAGCTGCCACAACTACCACCGCGGCCGTTGGATTTAGCCATAATGATCTTGTCACAAGAACTCCTTGGAATAATGAACAGGTGAGAACTCTAGATCCTAAAGCTGTGAGTGATGAGAATTGCACTGGAAATACTAGTGATGGCAACAACACATGGTGGAGGAGTGGAGGGTCAGAGAAGAGCAAGGTGAAAGTGAGAAGGAAGCTCAGAGAGCCTAGGTTTTGTTTCCAAACAAGAAGTGATGTGGATGTGCTTGATGATGGTTACAAATGGAGGAAGTATGGTCAGAAAGTTGTCAAGAATAGCCTTCATCCAAGGTAA 513 0.4386 MEGERDVPNYELQVSFTNTPQAIHEMGFVQFEENQVLSFVSPSTQSQLSQSLNSGGSTTNVPTGAAATTTTAAVGFSHNDLVTRTPWNNEQVRTLDPKAVSDENCTGNTSDGNNTWWRSGGSEKSKVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPR 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00116 170 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 58 170 IPR044810 GO:0003700
Trre15g00116 170 MobiDBLite consensus disorder prediction 100 123 - -
Trre15g00116 170 Pfam WRKY DNA -binding domain 150 170 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre15g00116 170 SUPERFAMILY WRKY DNA-binding domain 141 170 IPR036576 GO:0003700|GO:0006355|GO:0043565
Trre15g00116 170 MobiDBLite consensus disorder prediction 100 121 - -
Trre15g00116 170 ProSiteProfiles WRKY domain profile. 144 170 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre15g00116 170 Gene3D WRKY domain 136 170 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00116 Trre-Chr15 811047 812251 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g00116 3 170 WRKY Transcription Factor Family AT2G44745 48.295 9.41e-38 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Trre15g00116 WRKY 1.7e-06 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00116 - - var:108347245 265.774