Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00110 ATGTCTCTGCCGGAATCACAACTCGATCCAATTCTCTTTCTCCATGAACAATCCTGGCACCTCTTATCACTACTGCTCCAGATCGGTCATCCCGTCGACGCCGATTATCTATCTTCCCGTTGCCGGTTATTCAACGCTTCTCCCAATTTCATTCGTTTCGTTGCATCGCTTTCTGATTCTCCTCTCTCTGTTAACATAGACGGTCTTCTAACTCCTTCCGTTACAGCAGCTTTGTCCATCGCTAGGTTTTTCAAAGTTCATTTCAATAATTCAACTCCATCCAATTCTCGAAAACGCAAGTTGATTTTGTCAATTACTGAAGGTGGAAGAGATGCTAAACGACTCGCAATTGGTGATAAAGTTCCGGAATTTTTCGTCAAGAGTTTTTCTGATACTACTGCAGAGGCTATGATGAGAAGTTTCCTTGCAATGCAATTTGAGTCTCGGATTATGCATGGAGGGAATAGGATTCCTATACGTATTGATACAATTAGAGAGCGTTTAGGTTGTTCGGAACCAAATTTTGAATACAGGGAAGCTGATAATGATGGCATAACAAATCCGGCCCAGGGAGATATTTATGACTTTCTGATCAAAACCAGCAAGAGTTTTTTCATTAATGAAAGTGGCTTGATGAAGCTTGACAGGGATATAGATAGACTTGCGGGGAATAATCCCTTTGCGAATATTCCTCCACCAACTAATGTCCAGGATCAATCTCTTTGTAATGAGGGTGGTGTTGTTGGTATTGGATCAGAGAAGAAAATGGATTGCTTTGACACATTTGGGAATGAATATCCTGAACAAAACATAACCCCTACTGTGGATGGTGATGATGTTTGTAGAAACAATACTTGCAAAGATCAACTACGGGAATCTAACGAAATAAACGAAGATGAGGAAAGAGGTCCAAACGAAGGACTAATTAATGATGACAAAAATAGAGAGATGGAAAATGTTGCTCAGAGGGTCAATCCAATAGTATTTGGAGAAGAGCCAACAAAAGTTTTGGAATTTAAAAAGGGCATGCATGTATTAGATTTGGAGAAAAACAAGAGAGCAAGAAGCATGGTGACCCGGTCTACCAATAAAGCGGCTCAGTCCTCTTCAAATCCAAAGCAGGTTCTGAAAACTTCTCGCATATTGAAGGGAGGACTGAAAAATGATCAACATTCAATGACTCAAATTCTAACAGAGTCACTAGCCTGTAACAAATTTGATAATGTTCCACACAAAATTGATCAATGTAAAGACGATCAGAACATTATTGCAAAAAACAAACTTAAACCAAGCCGTAAAGAAAACATGGCAGAAGATAACTCCATGACTTCTAAGGTGGAGAAAAAAACATTTCCATCTTTTGAGTCTTTTATAATAGAGGAGGAAGAAGGTTCAGGTGGTTATGGCATTGTTTACCGTGCCCAAAGAAAAACTGATGGAAAAAGACTTGCTATAAAATGTCCTCATAGTAATGCTCATAAAAACCATGTAAATAATGAGCGCAATATGCTTGAGCGTTTTGGGGGTAAAAGCTTTATTATAAAGTTTGAAGGTTCGTTCAAAAGTGCCAACAGTGACTGCTTTGTTTTAGAACATGTTGAGCATGACAGACCTGAGGTTTTGAAAAAAGAAATTGACATAACCGAGCTTCAGTGGTATGGGTTTTGCATGTTCAAGGCACTTGCGTGCTTGCACAGAGAGGGTGTCGTTCACCGAGATGTCAAACCTGGAAACTTCCTTTTCTCTCGAAAGCTAAAGAAAGGCTACCTTATTGACTTCAACCTTGCCATGGATTTAAAGCAGAAGTACAATATCGGAAGTAAATCAAAACCAAGCTTTGATGCATCCAATAATATTCCTCTGCCTTCTGGTCCTTCCTCGGTGGTTCAAGAAAAGAATCTTGGAGGAATCAATTCTCTAACATCCAATAAAAGGGAATTGACATATCATAGGAAATATTCTGAAATTAATAGGCATATGAAGCCAAAGGCTAATGTTGGTCATCTGAAAAATTGTCCTGATAAGGCTGTTGCGAATTTACGTAGAGCACCAGGAGCAGATGGCTCAGGTATAACCTCTGCCAAAGATATTACTAGCACTAAGACTGCTTCTGCTGATAGGCACCGAGAACCCATACCTTTCCGAGGAAGAAAAGAGCTTATCAGCCTCGTGCAGAATTCTATGCAATGTGCAAACAGTAGTTCAATTAAAAGTCCTTCTTCTCAGAGGAAAAGGGTTACTGCTCCTTCAAGCAAGGCAGATGGAAGGACACTTCATCTTACGCCGATGCCTATACATTCATCTACGGTTGCAGTGGGATCATTTAGAAGCAAAGGGGATGGAAAACATAAAAGAGAGGGCCCTTGTGTTGGAACAAAGGGATTTCGTGCCCCAGAGGTTTTATTGAGGTCTCAGATTCAAGGAACAAAGGTTGATATTTGGTCAGCTGGAGTCACTCTACTATACATGCTGATGGGAAAAACTTCTTTCCCTGGCGAACCAGAACAAAGTTTAAAAGAAATTGCCAAATTGCGGGGAAGTGAAGAGCTTTGGGAAGTGGCCAAGCTGCATGACCGTGAAGCATCCTTTCCATTGGAGTTATTTGATGACCAGTACTTGAAATCATACGACATAGAAACCTGGTGCAAGACTCACACAAAAAGACCAGAGTTTGTTGATCAAGTCCCAAAATCATTGTTTGATTTAATAGACAAGTGTCTAACAGTAAACCCAAGGAGTAGGATTAGCGTTGATGAAGTTCTAAGGCATGAATATTTTTCAAATTGTAATCGTATCCTGAGAAAGCAAAGGATGATGCGACTCGGCTTAGACAGTGACGATTAA 2844 0.4012 MSLPESQLDPILFLHEQSWHLLSLLLQIGHPVDADYLSSRCRLFNASPNFIRFVASLSDSPLSVNIDGLLTPSVTAALSIARFFKVHFNNSTPSNSRKRKLILSITEGGRDAKRLAIGDKVPEFFVKSFSDTTAEAMMRSFLAMQFESRIMHGGNRIPIRIDTIRERLGCSEPNFEYREADNDGITNPAQGDIYDFLIKTSKSFFINESGLMKLDRDIDRLAGNNPFANIPPPTNVQDQSLCNEGGVVGIGSEKKMDCFDTFGNEYPEQNITPTVDGDDVCRNNTCKDQLRESNEINEDEERGPNEGLINDDKNREMENVAQRVNPIVFGEEPTKVLEFKKGMHVLDLEKNKRARSMVTRSTNKAAQSSSNPKQVLKTSRILKGGLKNDQHSMTQILTESLACNKFDNVPHKIDQCKDDQNIIAKNKLKPSRKENMAEDNSMTSKVEKKTFPSFESFIIEEEEGSGGYGIVYRAQRKTDGKRLAIKCPHSNAHKNHVNNERNMLERFGGKSFIIKFEGSFKSANSDCFVLEHVEHDRPEVLKKEIDITELQWYGFCMFKALACLHREGVVHRDVKPGNFLFSRKLKKGYLIDFNLAMDLKQKYNIGSKSKPSFDASNNIPLPSGPSSVVQEKNLGGINSLTSNKRELTYHRKYSEINRHMKPKANVGHLKNCPDKAVANLRRAPGADGSGITSAKDITSTKTASADRHREPIPFRGRKELISLVQNSMQCANSSSIKSPSSQRKRVTAPSSKADGRTLHLTPMPIHSSTVAVGSFRSKGDGKHKREGPCVGTKGFRAPEVLLRSQIQGTKVDIWSAGVTLLYMLMGKTSFPGEPEQSLKEIAKLRGSEELWEVAKLHDREASFPLELFDDQYLKSYDIETWCKTHTKRPEFVDQVPKSLFDLIDKCLTVNPRSRISVDEVLRHEYFSNCNRILRKQRMMRLGLDSDD 947
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00110 947 FunFam Kinase like protein 767 937 - -
Trre15g00110 947 MobiDBLite consensus disorder prediction 731 748 - -
Trre15g00110 947 PANTHER OVARIAN-SPECIFIC SERINE/THREONINE-PROTEIN KINASE LOK-RELATED 405 935 - -
Trre15g00110 947 Pfam Protein kinase domain 461 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre15g00110 947 Pfam Protein kinase domain 789 926 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre15g00110 947 Gene3D Transferase(Phosphotransferase) domain 1 766 941 - -
Trre15g00110 947 MobiDBLite consensus disorder prediction 292 314 - -
Trre15g00110 947 Gene3D Transferase(Phosphotransferase) domain 1 421 612 - -
Trre15g00110 947 MobiDBLite consensus disorder prediction 731 761 - -
Trre15g00110 947 FunFam Probable serine/threonine-protein kinase DDB_G0291918 449 615 - -
Trre15g00110 947 ProSiteProfiles Protein kinase domain profile. 457 926 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre15g00110 947 SUPERFAMILY Protein kinase-like (PK-like) 440 930 IPR011009 -
Trre15g00110 947 MobiDBLite consensus disorder prediction 683 707 - -
Trre15g00110 947 SMART serkin_6 457 926 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre15g00110 947 ProSitePatterns Serine/Threonine protein kinases active-site signature. 569 581 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00110 Trre-Chr15 764472 770614 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g00110 790 930 Core Cell Cycle Gene Families AT3G48750 34.483 1.06e-12 68.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-2 Trre15g00110 Pkinase 1.6e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00110 K02214 - gmx:100795742 1072.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g00110 15 764472 770614 Trre15g00110 15 764472 770614 ECH