Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00109 ATGTCTCTGCCGGAATCACAACTCGATCCAATTCTCTTTCTCCATGAACAATCCTGGCACCTCTTATCACTACTGCTCCAGATCGGTCATCCCGTCGACGCCGATTATCTATCTTCCCGTTGCCGGTTATTCAACGCTTCTCCCAATTTCATTCGTTTCGTTGCATCGCTTTCTGATTCTCCTCTCTCTGTTAACATAGACGGTCTTCTAACTCCTTCCGTTACAGCAGCTTTGTCCATCGCTAGGTTTTTCAAAGTTCATTTCAATAATTCAACTCCATCCAATTCTCGAAAACGCAAGTTGATTTTGTCAATTACTGAAGGTGGAAGAGATGCTAAACGACTCGCAATTGGTGATAAAGTTCCGGAATTTTTCGTCAAGAGTTTTTCTGATACTACTGCAGAGGCTATGATGAGAAGTTTCCTTGCAATGCAATTTGAGTCTCGGATTATGCATGGAGGGAATAGGATTCCTATACGTATTGATACAATTAGAGAGCGTTTAGGTTGTTCGGAACCAAATTTTGAATACAGGGAAGCTGATAATGATGGCATAACAAATCCGGCCCAGGGAGATATTTATGACTTTCTGATCAAAACCAGCAAGAGTTTTTTCATTAATGAAAGTGGCTTGATGAAGCTTGACAGGGATATAGATAGACTTGCGGGGAATAATCCCTTTGCGAATATTCCTCCACCAACTAATGTCCAGGATCAATCTCTTTGTAATGAGGGTGGTGTTGTTGGTATTGGATCAGAGAAGAAAATGGATTGCTTTGACACATTTGGGAATGAATATCCTGAACAAAACATAACCCCTACTGTGGATGGTGATGATGTTTGTAGAAACAATACTTGCAAAGATCAACTACGGGAATCTAACGAAATAAACGAAGATGAGGAAAGAGGTCCAAACGAAGGACTAATTAATGATGACAAAAATAGAGAGATGGAAAATGTTGCTCAGAGGGTCAATCCTGTAGCATGTGGAGAAGAGCCAACGCCAGTTTCGGAATTGAAAAAGGGTATACTAAGAGAATCTAATGAAAATAGTAAAGAAGAGGAAATAGGTTTAAAGGAAGGATTGATTAGTTATGAGAAAAATAGAGAGATGGAAGATGTTGCTCAACAGGTCAATCCAATAGTATTTGGAGAAGAGCCAACAAAAGTTTTGGAATTTAAAAAGGGCATGCATGTATTAGATTTGGAGAAAAACAAGAGAGCAAGAAGCATGGTGACCCGGTCTACCAATAAAGCGGCTCAGTCCTCTTCAAATCCAAAGCAGGTTCTGAAAACTTCTCGCATATTGAAGGGAGGACTGAAAAATGATCAACATTCAATGACTCAAATTCTAACAGAGTCACTAGCCTGTAACAAATTTGATAATGTTCCACACAAAATTGATCAATGTAAAGACGATCAGAACATTATTGCAAAAAACAAACTTAAACCAAGCCGTAAAGAAAACATGGCAGAAGATAACTCCATGACTTCTAAGGTGGAGAAAAAAACATTTCCATCTTTTGAGTCTTTTATAATAGAGGAGGAAGAAGGTTCAGGTGGTTATGGCATTGTTTACCGTGCCCAAAGAAAAACTGATGGAAAAAGACTTGCTATAAAATGTCCTCATAGTAATGCTCATAAAAACCATGTAAATAATGAGCGCAATATGCTTGAGCGTTTTGGGGGTAAAAGCTTTATTATAAAGTTTGAAGGTTCGTTCAAAAGTGCCAACAGTGACTGCTTTGTTTTAGAACATGTTGAGCATGACAGACCTGAGGTTTTGAAAAAAGAAATTGACATAACCGAGCTTCAGTGGTATGGGTTTTGCATGTTCAAGGCACTTGCGTGCTTGCACAGAGAGGGTGTCGTTCACCGAGATGTCAAACCTGGAAACTTCCTTTTCTCTCGAAAGCTAAAGAAAGGCTACCTTATTGACTTCAACCTTGCCATGGATTTAAAGCAGAAGTACAATATCGGAAGTAAATCAAAACCAAGCTTTGATGCATCCAATAATATTCCTCTGCCTTCTGGTCCTTCCTCGGTGGTTCAAGAAAAGAATCTTGGAGGAATCAATTCTCTAACATCCAATAAAAGGGAATTGACATATCATAGGAAATATTCTGAAATTAATAGGCATATGAAGCCAAAGGCTAATGTTGGTCATCTGAAAAATTGTCCTGATAAGGCTGTTGCGAATTTACGTAGAGCACCAGGAGCAGATGGCTCAGGTATAACCTCTGCCAAAGATATTACTAGCACTAAGACTGCTTCTGCTGATAGGCACCGAGAACCCATACCTTTCCGAGGAAGAAAAGAGCTTATCAGCCTCGTGCAGAATTCTATGCAATGTGCAAACAGTAGTTCAATTAAAAGTCCTTCTTCTCAGAGGAAAAGGGTTACTGCTCCTTCAAGCAAGGCAGATGGAAGGACACTTCATCTTACGCCGATGCCTATACATTCATCTACGGTTGCAGTGGGATCATTTAGAAGCAAAGGGGATGGAAAACATAAAAGAGAGGGCCCTTGTGTTGGAACAAAGGGATTTCGTGCCCCAGAGGTTTTATTGAGGTCTCAGATTCAAGGAACAAAGGTTGATATTTGGTCAGCTGGAGTCACTCTACTATACATGCTGATGGGAAAAACTTCTTTCCCTGGCGAACCAGAACAAAGTTTAAAAGAAATTGCCAAATTGCGGGGAAGTGAAGAGCTTTGGGAAGTGGCCAAGCTGCATGACCGTGAAGCATCCTTTCCATTGGAGTTATTTGATGACCAGTACTTGAAATCATACGACATAGAAACCTGGTGCAAGACTCACACAAAAAGACCAGAGTTTGTTGATCAAGTCCCAAAATCATTGTTTGATTTAATAGACAAGTGTCTAACAGTAAACCCAAGGAGTAGGATTAGCGTTGATGAAGTTCTAAGGCATGAATATTTTTCAAATTGTAATCGTATCCTGAGAAAGCAAAGGATGATGCGACTCGGCTTAGACAGTGACGATTAA 3006 0.3992 MSLPESQLDPILFLHEQSWHLLSLLLQIGHPVDADYLSSRCRLFNASPNFIRFVASLSDSPLSVNIDGLLTPSVTAALSIARFFKVHFNNSTPSNSRKRKLILSITEGGRDAKRLAIGDKVPEFFVKSFSDTTAEAMMRSFLAMQFESRIMHGGNRIPIRIDTIRERLGCSEPNFEYREADNDGITNPAQGDIYDFLIKTSKSFFINESGLMKLDRDIDRLAGNNPFANIPPPTNVQDQSLCNEGGVVGIGSEKKMDCFDTFGNEYPEQNITPTVDGDDVCRNNTCKDQLRESNEINEDEERGPNEGLINDDKNREMENVAQRVNPVACGEEPTPVSELKKGILRESNENSKEEEIGLKEGLISYEKNREMEDVAQQVNPIVFGEEPTKVLEFKKGMHVLDLEKNKRARSMVTRSTNKAAQSSSNPKQVLKTSRILKGGLKNDQHSMTQILTESLACNKFDNVPHKIDQCKDDQNIIAKNKLKPSRKENMAEDNSMTSKVEKKTFPSFESFIIEEEEGSGGYGIVYRAQRKTDGKRLAIKCPHSNAHKNHVNNERNMLERFGGKSFIIKFEGSFKSANSDCFVLEHVEHDRPEVLKKEIDITELQWYGFCMFKALACLHREGVVHRDVKPGNFLFSRKLKKGYLIDFNLAMDLKQKYNIGSKSKPSFDASNNIPLPSGPSSVVQEKNLGGINSLTSNKRELTYHRKYSEINRHMKPKANVGHLKNCPDKAVANLRRAPGADGSGITSAKDITSTKTASADRHREPIPFRGRKELISLVQNSMQCANSSSIKSPSSQRKRVTAPSSKADGRTLHLTPMPIHSSTVAVGSFRSKGDGKHKREGPCVGTKGFRAPEVLLRSQIQGTKVDIWSAGVTLLYMLMGKTSFPGEPEQSLKEIAKLRGSEELWEVAKLHDREASFPLELFDDQYLKSYDIETWCKTHTKRPEFVDQVPKSLFDLIDKCLTVNPRSRISVDEVLRHEYFSNCNRILRKQRMMRLGLDSDD 1001
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00109 1001 ProSiteProfiles Protein kinase domain profile. 511 980 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre15g00109 1001 Gene3D Transferase(Phosphotransferase) domain 1 475 666 - -
Trre15g00109 1001 MobiDBLite consensus disorder prediction 785 815 - -
Trre15g00109 1001 ProSitePatterns Serine/Threonine protein kinases active-site signature. 623 635 IPR008271 GO:0004672|GO:0006468
Trre15g00109 1001 MobiDBLite consensus disorder prediction 737 761 - -
Trre15g00109 1001 MobiDBLite consensus disorder prediction 292 314 - -
Trre15g00109 1001 PANTHER OVARIAN-SPECIFIC SERINE/THREONINE-PROTEIN KINASE LOK-RELATED 459 989 - -
Trre15g00109 1001 Gene3D Transferase(Phosphotransferase) domain 1 820 995 - -
Trre15g00109 1001 SMART serkin_6 511 980 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre15g00109 1001 Pfam Protein kinase domain 843 980 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre15g00109 1001 Pfam Protein kinase domain 515 658 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre15g00109 1001 SUPERFAMILY Protein kinase-like (PK-like) 494 984 IPR011009 -
Trre15g00109 1001 FunFam Probable serine/threonine-protein kinase DDB_G0291918 503 669 - -
Trre15g00109 1001 FunFam Kinase like protein 821 991 - -
Trre15g00109 1001 MobiDBLite consensus disorder prediction 785 802 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00109 Trre-Chr15 764472 770614 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g00109 844 983 Core Cell Cycle Gene Families AT3G48750 34.722 1.04e-12 68.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-2 Trre15g00109 Pkinase 1.7e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00109 K02214 - gmx:100795742 1046.96