Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00098 ATGGTCAAGAGTCATGTTTTATTCTTTTTTGTGTCTTTGATTTTCGGATCAATAATTTCTTTCATGTGTGATGCTACCAAAAATGATGATGAAACCAGTAAACTTTACATTGTATATATGGGTTCACTTCCTAAGGAAGCATCATATTCTCCAACCTCTCACCATCTTAGCATATTAAAACAAGTTATTTATGATAGTGATATCGAAAATCACTTGGTTCAAAGTTACAAGAGGAGTTTTAATGGTTTTTCTGTTATACTTAATGATCAACAAAGAGAAAAACTTGTTGGCATGAAAGGTGTTGTCTCAGTGTTTCCAAGCCAAGAGTATCACCTTCAAACCACAAGATCGTGGGACTTCCTTGGTTTACCCCATTCAAGCAAAAGAGGTAAAACTGTTGAGAGTGATTTGGTGATTGGAGTCTTAGACACTGGAATTTGGCCGGAATCTAAAAGTTTTAACGACAAAGGTCTTGGTCCTATTCCAAAAAAGTGGAGGGGAGTTTGTGCAGGCGGTGGTAACTTTAGTTGCAACAATAAGATCATTGGAGCACGATGGTATCCTGGTAGGGAGGGTGAGAGTGCAAGAGACCAATTTGGGCATGGAACACATGTGGCATCAATAGTAGGCGGAAGAAAGATAAAGGGTGTGAGCTATCACGGCCTTGCAAAAGGAACTATAAGAGGCGGAGTTCCATCTTCAAGGATTGCTGTATACAAAGTTTGTAACATAAAATGTCGTGATGATAATATTTTAGCAGCTTTTGATGATGCCATTGCCGATGGAGTTGACATCATTAGCATATCTATTGGAAACGAATATGCAGTTGAATTTCTTAGAGATACTATTGCTATTGGTTCTTTTCATGCAATGGAAAAAGGAATACTCACAGTGCAAGGAGCAGGCAACTATGGTCCTAACCCAAGTACTATTTCAAGTGTAGCACCTTGGTTATTTAGTGTTGCCGCAACTACCATAGACCGTGAATTCATTGATAAACTCATTCTTGGAAATGGAAAGACTTTTATTGGGAAGTCGATTAATATTGTTCCTTCAAATGGCACAAAATTTCCAATAGTTGTGTGTAGTTCTACAGCTTGCCATGGAGATTATATATCCCCTAAAAAATGTCGATGTATAAATAAAAAATTGGTAAAGGGTAAGATTGTTTTGAGTGGAGATGCAGGTGGTGGACAATTGGCTTATCCGTATGGGGCAATTGGTTCGATCCTTAATTTTACATTTGAATTTTCTCTTGTCACTCATCGACCTTCACTTAACTTGGATTCAAAAGACTTTGATCTTGTTCAATCTTATACTTACTCCACTAAATACCCTGTAGCTGAAATATTGAAGAGTGATGTCGTTCAAGACACAACTGCTCCAAAAATTGCATCTTTCTCTTCTCGTGGTCCGAATTCTATTGTACCAGAAATTATGAAGCCAGATATAAGTGCTCCCGGAGTTGATATCTTGGCAGCATATTCACCTAACGGACCAAGCGTTGCTGATGCGGTTTATAACGTAAATGAGAAATATAGTATACTATTTGGTACCTCTATGGCATGTCCCCATGTTGCTGGAGTTGCCGCATATGTCAAATCATTTCATCCAGATTGGTCACCCGCAGCTATTAAATCTGCCATCATGACCACAACGAAACCGGTTAATGGTAATTATAATGATATGGTGGGTGAGTTCGCTTATGGATCTGGAATTGTCAATCCACAACAAGCTATTCACCCAGGATTGATTTATGACATTACTAAGCAAGATTATACGCAAATGCTTTGTAATTTTGGTTATAATGATGCCAAAATTGAACAGATTAGTGGAGAAAAATCAAGTTGCTATGGAGCTTCGAATAAAAATTTGGTTAAAGATATAAACTATCCTGCACTAGTGATTCTTCTTAGGCCTCATAAGCGTTTTAATGTTAATATTCATAGAACAGTGACAAATGTTGGCTCTCCTAACTCAAGCTACACAGCTACTATCATCCCAATTCCAAATATCAAGATTAAAGTGGTGCCAAAACTTCTCTCATTCAAATCCTTACATGAGAAACAAACCTTTGTTGTCATTGTTACCGAAGGAGCAAAATCAAATCAAACTTTGTTTTCTTCATCACTTGTCTGGTCAGACGGAATTCACAATGTAAAGAGTCCAATTATTATACAAAGACTCTCTTAA 2193 0.3744 MVKSHVLFFFVSLIFGSIISFMCDATKNDDETSKLYIVYMGSLPKEASYSPTSHHLSILKQVIYDSDIENHLVQSYKRSFNGFSVILNDQQREKLVGMKGVVSVFPSQEYHLQTTRSWDFLGLPHSSKRGKTVESDLVIGVLDTGIWPESKSFNDKGLGPIPKKWRGVCAGGGNFSCNNKIIGARWYPGREGESARDQFGHGTHVASIVGGRKIKGVSYHGLAKGTIRGGVPSSRIAVYKVCNIKCRDDNILAAFDDAIADGVDIISISIGNEYAVEFLRDTIAIGSFHAMEKGILTVQGAGNYGPNPSTISSVAPWLFSVAATTIDREFIDKLILGNGKTFIGKSINIVPSNGTKFPIVVCSSTACHGDYISPKKCRCINKKLVKGKIVLSGDAGGGQLAYPYGAIGSILNFTFEFSLVTHRPSLNLDSKDFDLVQSYTYSTKYPVAEILKSDVVQDTTAPKIASFSSRGPNSIVPEIMKPDISAPGVDILAAYSPNGPSVADAVYNVNEKYSILFGTSMACPHVAGVAAYVKSFHPDWSPAAIKSAIMTTTKPVNGNYNDMVGEFAYGSGIVNPQQAIHPGLIYDITKQDYTQMLCNFGYNDAKIEQISGEKSSCYGASNKNLVKDINYPALVILLRPHKRFNVNIHRTVTNVGSPNSSYTATIIPIPNIKIKVVPKLLSFKSLHEKQTFVVIVTEGAKSNQTLFSSSLVWSDGIHNVKSPIIIQRLS 730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00098 730 CDD PA_subtilisin_like 334 450 - -
Trre15g00098 730 Gene3D - 597 729 - -
Trre15g00098 730 Pfam Peptidase inhibitor I9 36 112 IPR010259 -
Trre15g00098 730 ProSiteProfiles Serine proteases, subtilase domain profile. 109 580 - -
Trre15g00098 730 ProSitePatterns Serine proteases, subtilase family, histidine active site. 201 211 IPR022398 -
Trre15g00098 730 FunFam Subtilisin-like protease SBT1.5 136 335 - -
Trre15g00098 730 SUPERFAMILY Subtilisin-like 117 580 IPR036852 GO:0004252|GO:0006508
Trre15g00098 730 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 36 725 IPR045051 -
Trre15g00098 730 Pfam Fibronectin type-III domain 628 726 IPR041469 -
Trre15g00098 730 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 20 113 IPR037045 -
Trre15g00098 730 Gene3D Peptidase S8/S53 domain 136 593 IPR036852 GO:0004252|GO:0006508
Trre15g00098 730 Gene3D - 327 457 - -
Trre15g00098 730 CDD Peptidases_S8_3 110 552 IPR034197 -
Trre15g00098 730 PRINTS Subtilisin serine protease family (S8) signature 134 153 IPR015500 -
Trre15g00098 730 PRINTS Subtilisin serine protease family (S8) signature 517 533 IPR015500 -
Trre15g00098 730 PRINTS Subtilisin serine protease family (S8) signature 197 210 IPR015500 -
Trre15g00098 730 Pfam Subtilase family 135 572 IPR000209 GO:0006508|GO:0008236
Trre15g00098 730 ProSitePatterns Serine proteases, subtilase family, serine active site. 518 528 IPR023828 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00098 Trre-Chr15 690841 693986 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g00098 6 726 Subtilisin-like Serine Gene Family AT3G46850 50.681 0.0 723
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00098 - - psat:127076787 912.138