Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Trre15g00088 | ATGGTGGAGGAGACCATGGTGGAGGGGACCTTGTCTCTTGATGCTGTTATAAGGGAAGCTGTTGATCTGGAGAACATTCCTATTGAGGAGGTTTTTGATAATCTCAAATGCACAAAAGAAGGTTTAAGCTCTGAGCAAGTACAAAATAGGCTTGATATGTTTGGATACAATAAACTTGAAGAAAAGAAGGAAAGTAAAATACTAAAGTTTTTAGGGTTTATGTGGAATCCTTTGTCATGGGTTATGGAAGCTGCTGCTATCATGGCCATTGCTATGGCACATGGAGGAAGAAAGCCAGATGGAAGTAAGAAACCTGGAGATTATCAAGATTTTGTTGGCATAATTATTTTGCTAATTATAAACTCTACCATAAGTTTCATAGAAGAAAACAATGCTGGTAATGCAGCTGCTGCCCTTATGGCAAGATTGGCTCCAAAAGCAAAGGTACTTCGTGATGGAAAATGGAGTGAAGAAGACGCTTCAGTGTTGGTCCCTGGAGACATAGTAAGTATCAAGCTAGGTGACATTATTCCTGCGGATGCACGTCTCCTTGAAGGAGATCCTTTGAAGATTGATCAGTCTGCTCTTACTGGAGAGTCACTTCCTGTGACAAAACATCCTGGAGAAGGAGTATATTCTGGTTCAACCTGCAAGCAAGGAGAAATTGAGGCCATAGTCATTGCAACTGGAGTTCACACATTTTTTGGGAAAGCAGCTCATCTTGTCGAAAACACAACACATGTTGGACATTTCCAGCAGGTTCTGACATCTATTGGGAATTTCTGTATCTGTTCAATTGCTATTGGAATGATAATTGAAATCATTGTGATATATGGCGTCCACGGATATGGATACAGAAATGGTATTGATAACCTTCTCGTGCTACTTATCGGTGGGATCCCTATTGCTATGCCAACTGTTCTTTCAGTTACAATGGCTATTGGTTCGCATAAATTGTCTCAGCAGGGCGCCATAACAAAGAGAATGACTGCTATTGAAGAAATGGCTGGAATGGATGTGTTATGTAGTGACAAAACAGGCACATTAACTCTTAACAAGCTTTCAGTGGACAGGGAGATGATTGAGGTTTTTGCTAAAGGTGTTGACAAGGATTTGGTTGTACTTATGGCTGCAAGAGCATCGAGGATGGAGAACCAGGATGCAATTGATTGTGCAATCGTTTCAATGTTGGCAGACCCAAAGGAGGCACGAGCTGGAATAAAAGAAGTTCACTTCCTTCCATTCAATCCAACTGATAAAAGAACTGCACTTACATACATTGATGCTGCTGGTACTATGCACAGGGTTAGCAAAGGTGCACCAGAGCAGATTCTCAATCTTGCACATAATAAGGCAGAAATCAGCCAGAAAGTTCATGCAATGATTGACAGGTTTGCAGAACGCGGACTTCGTTCTCTTGGGGTTGCTAGACAGGTAGTACCTGAAGGAACTAAGGACAGTCCAGGAGGACCATGGGAGTTTGTTGCCCTTCTCCCTCTTTTTGACCCTCCTCGCCATGATAGTGCAGAAACAATTAGAAGAGCTCTTGATCTTGGTGTTAGTGTCAAAATGATCACCGGCGATCAACTTGCAATAGGAAAGGAAACAGGAAGGCGTCTCGGGATGGGGACAAACATGTATCCTTCATCGTCACTGCTTGGCGAAAATAAAGATCAATTAGGTTCTGTCTCCATTGATGATCTCATTGAGAATGCTGATGGTTTTGCTGGTGTCTTTCCTGAACACAAGTATGAGATTGTGAAGAGATTACAAGCTAGAAAGCACATTTGTGGGATGACTGGTGATGGAGTGAATGATGCACCTGCCTTAAAGATAGCCGACATAGGTATTGCAGTGGCAGATTCTACAGATGCTGCACGGAGCGCTTCTGACATAGTGCTGACAGAACCTGGTTTGAGTGTCATCATAAGTGCAGTTTTAACCAGCCGTGCAATTTTCCAGAGAATGAAAAACTACACAATATATGCTGTATCTATCACTATTCGTATTGTGCTGGGTTTCATGTTACTTAACGCCTTTTGGAGTTTCGACTTTCCACCCTTTATGGTTCTTATCATTGCCATTCTCAATGATGGTACCATCATGACAATATCTAAAGATAGGGTTAAGCCTTCTCCACTTCCAGATAGTTGGAAGCTTAGTGAAATTTTTGCAACTGGGGTTATTCTTGGTACCTATCTGGCTCTAATGACAGTGATCTTCTTCTATGTAATGTTTGAAACAAACTTTTTTCCTAACCATTTTGGTGTGAAACACATCCGCCCTGATCTTCATGCTCCTGTCACTGAAGAAATGAAAGAGATGTTTGCTTCTGCTGTCTATCTTCAAGTCAGTACAATTAGTCAAGCCTTAATCTTTGTGACACGGTCCAGGGGTTGGTCCTACACAGAAAGACCTGGTCTTTTGCTTGTTTTTGCCTTTGTTATTGCTCAGCTGGTTGCAACTGCTATATCAGCATTTGCTAATTGGGAAATTGCTGGAATCAGAAGAATAGGTATGGGCTGGGCAGGAGTCATTTGGCTGTTCAACATTGTAACTTATGTTTTCCTTGATCCTTTAAAGTTTGCTGTTGCTTATCAACAAAGCGGAAGGGCTTGGAATCTGGTGGTAAACCAAAGAACTGCATTCACCAACAAAAATGATTTTGGTAAAGAATCTCGTGAGGCTGCATGGGCTGCTGAGCAGAGAACCTTGCACGGTCTTCGCTCTTTTGAGTCGAAAGGGTTTGCAGAGAAGCACAACAACCATAGAGAAATAAATACAATGGCAGATGAGGCTAAGAGGCGAGCAGAATTAGCAAGGTTGAGAGAGCTTCACACACTGAAAGGAAGAGTGGAATCGTTTGCCAGGCTTAGGGGTTTGGATGTTGAGACCATGAATGGGCACTACACTGTCTAA | 2919 | 0.4217 | MVEETMVEGTLSLDAVIREAVDLENIPIEEVFDNLKCTKEGLSSEQVQNRLDMFGYNKLEEKKESKILKFLGFMWNPLSWVMEAAAIMAIAMAHGGRKPDGSKKPGDYQDFVGIIILLIINSTISFIEENNAGNAAAALMARLAPKAKVLRDGKWSEEDASVLVPGDIVSIKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKHPGEGVYSGSTCKQGEIEAIVIATGVHTFFGKAAHLVENTTHVGHFQQVLTSIGNFCICSIAIGMIIEIIVIYGVHGYGYRNGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHKLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDREMIEVFAKGVDKDLVVLMAARASRMENQDAIDCAIVSMLADPKEARAGIKEVHFLPFNPTDKRTALTYIDAAGTMHRVSKGAPEQILNLAHNKAEISQKVHAMIDRFAERGLRSLGVARQVVPEGTKDSPGGPWEFVALLPLFDPPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGENKDQLGSVSIDDLIENADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKIADIGIAVADSTDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLNAFWSFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLSEIFATGVILGTYLALMTVIFFYVMFETNFFPNHFGVKHIRPDLHAPVTEEMKEMFASAVYLQVSTISQALIFVTRSRGWSYTERPGLLLVFAFVIAQLVATAISAFANWEIAGIRRIGMGWAGVIWLFNIVTYVFLDPLKFAVAYQQSGRAWNLVVNQRTAFTNKNDFGKESREAAWAAEQRTLHGLRSFESKGFAEKHNNHREINTMADEAKRRAELARLRELHTLKGRVESFARLRGLDVETMNGHYTV | 972 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Trre15g00088 | 972 | CDD | P-type_ATPase_H | 41 | 862 | IPR006534 | GO:0008553|GO:0016020|GO:0120029 | |
| Trre15g00088 | 972 | Gene3D | - | 339 | 637 | IPR023214 | - | |
| Trre15g00088 | 972 | Gene3D | - | 354 | 501 | IPR023299 | GO:0000166 | |
| Trre15g00088 | 972 | SMART | Cation_ATPase_N_a_2 | 22 | 94 | IPR004014 | - | |
| Trre15g00088 | 972 | Pfam | E1-E2 ATPase | 143 | 321 | - | - | |
| Trre15g00088 | 972 | Gene3D | - | 921 | 972 | - | - | |
| Trre15g00088 | 972 | FunFam | Plasma membrane ATPase | 145 | 229 | - | - | |
| Trre15g00088 | 972 | SUPERFAMILY | HAD-like | 338 | 647 | IPR036412 | - | |
| Trre15g00088 | 972 | SFLD | Haloacid Dehalogenase | 324 | 651 | - | - | |
| Trre15g00088 | 972 | NCBIfam | HAD-IC family P-type ATPase | 114 | 549 | IPR001757 | GO:0005215|GO:0005524|GO:0016020|GO:0016887 |
Showing 1 to 10 of 35 entries
Duplication type information
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Trre15g00088 | K01535 | - | gmx:100794938 | 1614.74 |
Showing 1 to 1 of 1 entries