Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00075 ATGCTACTGCTCTTATCTTCACCATCTTCTTCATCACTCATGCAATCTTTTCCATTAAAATTCCTTTGTGCTGTACAAGGACAAGGAGAATCAAGTCATGGATGCACTAATAAAAAACCGAAGGATTACATAGTGCAGGATGAGAAAGTATTAAGGAGGAAACTTGTGATTTCTGTTCTGGTCTCAACTTGTGCTTTTCCAACATTATCTTCTCATGCGAAGACCAAAAGTATAAATCCGTATAATGAAAAACGTGTGCTACAACAAAATAAGAATATTCAAAAACAAAACAATGCACCAGATGACTTCCCAAATTTTATTAGAGAAGGTTTTGAAGTTAAAGTGATAGCACCAGATGACTATATAAAGCGTGATTCGGGGCTAATATACCGAGACTTTGAAGTTGGTACAGGTGATTGTCCAAAGGATGGTCAGCAGGTCACATTTCACTATGTTGGCTATAATGAATCTGGCCGCCGTATTGACAGTACGTATTTGCAAGGCGCTCCTGCTAAAATTCGCATGGGTAACAAGGCTTTGGTTCCAGGATTTGAGGAAGGAATTAGAGACATGAAAGCAGGTGGAAAGAGAAGAATAATCATTCCTCCTGATCTTGGACCCCCGGTAGGACCTTCAACATTTTTCAGCTCAAAACAATTTGAAGTTTTTGATGTTGAATTAATAAGCATACAAAGCTGTGAAAGAAGAGTGATAGTAGGATTTTATTCTGATGTTGTATGCAGTTGA 747 0.3802 MLLLLSSPSSSSLMQSFPLKFLCAVQGQGESSHGCTNKKPKDYIVQDEKVLRRKLVISVLVSTCAFPTLSSHAKTKSINPYNEKRVLQQNKNIQKQNNAPDDFPNFIREGFEVKVIAPDDYIKRDSGLIYRDFEVGTGDCPKDGQQVTFHYVGYNESGRRIDSTYLQGAPAKIRMGNKALVPGFEEGIRDMKAGGKRRIIIPPDLGPPVGPSTFFSSKQFEVFDVELISIQSCERRVIVGFYSDVVCS 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00075 248 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 141 227 IPR001179 GO:0003755
Trre15g00075 248 Gene3D - 81 237 IPR046357 GO:0003755
Trre15g00075 248 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 144 231 IPR001179 GO:0003755
Trre15g00075 248 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP20-2, CHLOROPLASTIC 23 248 IPR044239 -
Trre15g00075 248 SUPERFAMILY FKBP-like 67 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00075 Trre-Chr15 574110 577408 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g00075 139 233 Calmodulin-binding Proteins AT5G48570 35.052 1.83e-10 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00075 - - cam:101493728 407.142
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g00075 15 574110 577408 Trre15g00075 15 574110 577408 ECH