Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00039 ATGAGAGGTTTAAACATGGAGTACTTATACTACTACCTACCAATAATTGTTATGTTGTTGATACAGTTTATATTTGCTGGTCAGACTCTTGGCACAAGAATTGCACTATTGGAGGGTATGAGCCCAAGGGTATTTGTAGTGTACCGTTCTGCTTTTGCAACTATTGTTCTTGCTCCTTTTGCTTATTTATCAGGGAGAAACTCTGGCTCCTATTCCTTAAATTTAAGGAGTTTTTCCTTGATATTCCTTACCTCACTAATTGGCATTACAATGAATCAAAATTTATATTTTGAAGGTCTATATCTTGCTTCATCTTCAGTTGCGAGTGCCATTTGCAATCTTCTTCCAGCAATCACATTTGTAATAGCAGTTTTAGTAGGAATGGAGAAAGTGAATATTCGAAGTTTGAGAACTATAGCCAAAATAGTGGGAACGATTATATGTGTAAGTGGAGCGGTGTGCATTGCATTATTGAAGGGTCCAAAGTTGCTAAATGCAGAAAACATACCTTCAAAATCAATCTTAGGCTTAGCCTCAGAAAGTGATGAGAATTGGTTGCTTGGATGTTTGTCTCTTCTCGGATGCATTGTTGCCTGGTCAATTTTTCTTATTTTGCAGGTTCCAGCTTATGCAAGTCATCCAAATTATTTATCACTTTCAGCTTGGATGTGTTTTATGGCAACATTACAATCAGCAGCAGTTACACTATTTTTGGAGCCAAACCTTAATGCATGGAAGATTAATTCTGTACTTCAACTTGGTTGCTCTATATATGCAGGAGTTATGGAAATATACGTTGGAAGCTTGATAGGTGCAATTGGAGTGATCATTGGTTTGTATATTGTGCTTTGGGGCAAAGCTGAAGATGTAGTTGATGTGCAAGAGAAGATAGAACCAAAATCTATGGTTAATGAGACAGAGGAAGCATATAGTAAAACTGATTTAGAAGAACCATTTTTACATGCTGAATCTACATCACATCATTGA 987 0.3658 MRGLNMEYLYYYLPIIVMLLIQFIFAGQTLGTRIALLEGMSPRVFVVYRSAFATIVLAPFAYLSGRNSGSYSLNLRSFSLIFLTSLIGITMNQNLYFEGLYLASSSVASAICNLLPAITFVIAVLVGMEKVNIRSLRTIAKIVGTIICVSGAVCIALLKGPKLLNAENIPSKSILGLASESDENWLLGCLSLLGCIVAWSIFLILQVPAYASHPNYLSLSAWMCFMATLQSAAVTLFLEPNLNAWKINSVLQLGCSIYAGVMEIYVGSLIGAIGVIIGLYIVLWGKAEDVVDVQEKIEPKSMVNETEEAYSKTDLEEPFLHAESTSHH 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00039 328 PANTHER WAT1-RELATED PROTEIN 13 262 IPR030184 GO:0016020|GO:0022857
Trre15g00039 328 Pfam EamA-like transporter family 14 154 IPR000620 GO:0016020
Trre15g00039 328 SUPERFAMILY Multidrug resistance efflux transporter EmrE 48 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00039 Trre-Chr15 364010 367782 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g00039 12 328 Nodulin-like Gene Family AT4G30420 46.216 1.01e-101 302
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00039 - - gmx:100812331 406.371