Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00036 ATGGGATGTTTAGAAATAGAGTACTACATGCCAGTATTGGTTATGTTGTTGATACAATGTATATATGCAGGTATGAGTCTTAGCATAAGAATCGCACTTTTGGAGGGTATGAGTCCCAGAGTACTTGTGGTCTATCGCCATGCTTTTGCAACCATTGCTCTTGCTCCCATAGCTTATTTATCAGGTATTACGTTGAGTCAAAATTTATATTTTGAGGGTCTATATCTTGTTCCTTCTTCAATTGCGAGTGCCATGACCAATCTTATTCCAGCAGTAACATTTGTAATAGCAGCCTCTGTAGGAATGGAGAAAGTAAATATTCAAAGTTTGAGAACTGTTGCTAAAATTGTGGGAACATTGATATGTGTTGGTGGAGCAGTGTCCATCACATTGTTGAAAGGTCCAAAACTACTAAATGCTCAAAAATTACCTTCAAAATCAACCTTGGGAAGTGATGATAATTGGTTGCTTGGATGTCTAATTCTCTTGGCAAGTACTGTTGCCTGGTCAATTTGGCTCATTTTACAGGTTCCAGCTTATGCAAGTCATCCAAATTATTTATCATTGTCAGCTTGGATGTGTTTAATAACAACATTACAATCAGCAGTAGTAACACTATTCTTGGAGCCAAATCTTAATACTTGGAAGATTGATTCACTCCTTCAATTTGGTTGCACTTTGTATTCCGGAATTATGGGATCTGCAGTTGTATTTTGTCTCCAAGCATGGTGCATTACAAAGAGAGGACCTCTTTTTTCTGCAATGTTTAGTCCTCTTTTAACAGTGCTTGTGACTGTATTGGCTGCCATGTTGCTTCATGAGGAAATATATACAGGAAGCTTGATAGGTGCAATTGGAGTGATCATTGGTTTGTATATTGTGCTTTGGGGTAAAGCTGAAGATGTAGTCAAAGAGAATATAGTTCCTAAATTGATGCCTAATGAGAGAGAATCTTGTGGAACAAGGAATTGTAAAGATGATTTGGAAGAACCTCTTTTAGCTGATGAATCTTCATTATAG 1020 0.3725 MGCLEIEYYMPVLVMLLIQCIYAGMSLSIRIALLEGMSPRVLVVYRHAFATIALAPIAYLSGITLSQNLYFEGLYLVPSSIASAMTNLIPAVTFVIAASVGMEKVNIQSLRTVAKIVGTLICVGGAVSITLLKGPKLLNAQKLPSKSTLGSDDNWLLGCLILLASTVAWSIWLILQVPAYASHPNYLSLSAWMCLITTLQSAVVTLFLEPNLNTWKIDSLLQFGCTLYSGIMGSAVVFCLQAWCITKRGPLFSAMFSPLLTVLVTVLAAMLLHEEIYTGSLIGAIGVIIGLYIVLWGKAEDVVKENIVPKLMPNERESCGTRNCKDDLEEPLLADESSL 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00036 339 PANTHER WAT1-RELATED PROTEIN 10 302 IPR030184 GO:0016020|GO:0022857
Trre15g00036 339 Pfam EamA-like transporter family 157 295 IPR000620 GO:0016020
Trre15g00036 339 SUPERFAMILY Multidrug resistance efflux transporter EmrE 196 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00036 Trre-Chr15 334707 336952 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g00036 5 338 Nodulin-like Gene Family AT4G30420 50.541 1.98e-122 355
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00036 - - gmx:100812331 419.853