Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00035 ATGGGATGTTTAGAAATAGAGTACTACATGCCAGTATTGGTTATGTTGTTGATACAATGTATATATGCAGGTATGAGTCTTAGCATAAGAATCGCACTTTTGGAGGGTATGAGTCCCAGAGTACTTGTGGTCTATCGCCATGCTTTTGCAACCATTGCTCTTGCTCCCATAGCTTATTTATCAGGGAGAAACTCTGGCTCCTATTCCTTAAATTTAAGGAGTTTTTCCTTGATATTCATGACCTCGTTAATTGGTATTACGTTGAGTCAAAATTTATATTTTGAGGGTCTATATCTTGTTCCTTCTTCAATTGCGAGTGCCATGACCAATCTTATTCCAGCAGTAACATTTGTAATAGCAGCCTCTGTAGGAATGGAGAAAGTAAATATTCAAAGTTTGAGAACTGTTGCTAAAATTGTGGGAACATTGATATGTGTTGGTGGAGCAGTGTCCATCACATTGTTGAAAGGTCCAAAACTACTAAATGCTCAAAAATTACCTTCAAAATCAACCTTGGGAAGTGATGATAATTGGTTGCTTGGATGTCTAATTCTCTTGGCAAGTACTGTTGCCTGGTCAATTTGGCTCATTTTACAGGTTCCAGCTTATGCAAGTCATCCAAATTATTTATCATTGTCAGCTTGGATGTGTTTAATAACAACATTACAATCAGCAGTAGTAACACTATTCTTGGAGCCAAATCTTAATACTTGGAAGATTGATTCACTCCTTCAATTTGGTTGCACTTTGTATTCCGGAATTATGGGATCTGCAGTTGTATTTTGTCTCCAAGCATGGTGCATTACAAAGAGAGGACCTCTTTTTTCTGCAATGTTTAGTCCTCTTTTAACAGTGCTTGTGACTGTATTGGCTGCCATGTTGCTTCATGAGGAAATATATACAGGAAGCTTGATAGGTGCAATTGGAGTGATCATTGGTTTGTATATTGTGCTTTGGGGTAAAGCTGAAGATGTAGTCAAAGAGAATATAGTTCCTAAATTGATGCCTAATGAGAGAGAATCTTGTGGAACAAGGAATTGTAAAGATGATTTGGAAGAACCTCTTTTAGCTGATGAATCTTCATTATAG 1089 0.3719 MGCLEIEYYMPVLVMLLIQCIYAGMSLSIRIALLEGMSPRVLVVYRHAFATIALAPIAYLSGRNSGSYSLNLRSFSLIFMTSLIGITLSQNLYFEGLYLVPSSIASAMTNLIPAVTFVIAASVGMEKVNIQSLRTVAKIVGTLICVGGAVSITLLKGPKLLNAQKLPSKSTLGSDDNWLLGCLILLASTVAWSIWLILQVPAYASHPNYLSLSAWMCLITTLQSAVVTLFLEPNLNTWKIDSLLQFGCTLYSGIMGSAVVFCLQAWCITKRGPLFSAMFSPLLTVLVTVLAAMLLHEEIYTGSLIGAIGVIIGLYIVLWGKAEDVVKENIVPKLMPNERESCGTRNCKDDLEEPLLADESSL 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00035 362 SUPERFAMILY Multidrug resistance efflux transporter EmrE 219 321 - -
Trre15g00035 362 PANTHER WAT1-RELATED PROTEIN 10 325 IPR030184 GO:0016020|GO:0022857
Trre15g00035 362 Pfam EamA-like transporter family 11 152 IPR000620 GO:0016020
Trre15g00035 362 Pfam EamA-like transporter family 180 318 IPR000620 GO:0016020
Trre15g00035 362 SUPERFAMILY Multidrug resistance efflux transporter EmrE 45 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00035 Trre-Chr15 334707 336952 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g00035 5 361 Nodulin-like Gene Family AT4G30420 54.324 1.02e-134 387
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00035 - - gmx:100812331 468.774