Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00029 ATGGCCAAGTATAATGTTATATTATTCTTTGTGTTTTTAGCTTTGGCATCAAAAATTTCGTTGGCGTATGATGTCACTGAAAATGGTGATGAAAGCAGGAAACTTTACATTGTATACATGGGCTCACTTCCTAAAGGAGCATCATATTCCCCAACATCTCACCATATTAACTTGTTGGAACAAGTTATCGATGATAGTGACATACAAAATTGCTTAGTTCGAAGTTACAAGAGGAGTTTCAATGGTTTTGCCGCTATACTCAACGATCAACAAAGGAAAAAACTTGTCGGCATGAGAGGTGTGGTGTCAGTTTTTCCAAGTCCAGAGTACAACCTTAAAACCACGAGGTCGTGGGATTTTCTTGGTTTACCTCAATCAATCAAGCGAGACCAAACTGTTGAAAATGATTTGGTGATCGGAGTAATAGATACTGGAATTTGGCCAGAATCTGAAAGTTTCAACGATAAAGGTCTTGGTCCAATTCCAAGAAAATGGAAGGGAGTTTGTGCAGGTGGTGGTAACTTTAGTTGCAACAAGAAAATAATCGGAGCACGATTTTATGATGGTATAGATGAGAGTGCAAGAGACAATATTGGTCATGGATCCCACACATCATCAATAGCTGGCGGAAGAGATGTGGAAGGTGTGAGTTTTTATGGTCTTGCAAAAGGCACTGCAAGAGGTGGAGTCCCATCTTCAAGGATTGCTGCATACAAAGTTTGTTATGAAATGAAATGCATTGGAGCTTCAATTTTAGCTGCATTTGATGATGCAATTGCTGATGGAGTTGACGTCATTACCATCTCTATGGGTTATCCGACAATACTTGACTTTGTGAACGATCCAGTTGCCATTGGTTCATTTCATGCCATGGAAAAAGGAATACTCACAACGCAGTCTGCAGGAAACTCTGGTCCTTCGCCAAGTAGTGTCATAAGTGCAGCACCTTGGTTATTTACTGTTGCTGCAACTAGCATTGATCGTCAATTCATTACTAAGCTTATTCTTGGAAATGGAAAGACTTTCATCGGTAGGTCAATCTATACTGGCCCTTCAAATGGAACCAAATTTCCAATAGCTAGGCGTAATGCTAAAGCTTGCCCAAGTGGAAGAAATGCATCCCCTGAAATGTGTGATTGTTTGGACAAAAGTATGGTGAAGGGCAAGCTTGTTTTGTGTGGAGCAGGTGGAATGCTTTCTTCTAATACAGGTATAATTGGTTCAATACGTAATGTTACAGACTCTGGATTTGATGTTTTTTCTACCACTTACAAGCCTTCCCTTAACTTGAAAACCAAGGACTTTGTTCAAGTTCAATCTTACACAAACTCTACTAAATACCCTGTAGCTGAAATTTTAAAGAGTGGGATCTTCCACGACACCAATGCTCCTAAAGTTGCAATTTTCTCTTCTCGTGGCCCAAATCCTTTGGTTCCAGAAATTATGAAACCAGATATAAGTGCTCCTGGAGTGAATATCTTAGCTGCATATTCACCTTTAGCGGAATCCGAAGATATGAATGACAAGAGAAAGTTCAAATACAACCTATTATCTGGAACCTCTATGGCATGTCCTCACGCGGCTGGAGTTGTTGCATATGTAAAATCATTTCATCCAGACTGGTCACCAGCAGCTATCAAATCTGCCATTATGACAACTGCTAAACCTGTAAAAGGTACTTATGTTGATTTGGCAGGTGAATATGCTTATGGATCTGGGAATATCAATCCACAACAAGCCCTTCATCCTGGACTTGTTTATGACATCACTAAACAAGATTATGTGCAAATGCTTTGTAATTATGGTTATGATGAAAACAAAATTAAACAAATTAGTGGAGATAATTCTAGTTGCCATGAAGCTCCTGAAAGATCCTTGTTGAAAGATATAAACTATCCCGCAATGGTAATTCCGGTTGTGCCTGATAATAAGCCTTTCCATGTCAAGATTCATAGAACAGTCACAAACGTTGGCTTTCCCAACTCAACCTACAAGGCTACTCTCATCCATCATAATCCAAAAATCAAGATCAAAGTTGAACCAAAACTTCTCAAATTCAAATCATTACATGAGAAACAATCATTTGTTGTCACTATTATTGGGGGAGACAAATTAAATCAAACTGTGTTTTCCTCATCGCTCATTTGGTTCGATGGCACCCATCGCGTCAAAAGTCCTATTATTGTGCAAATACTACCTTTATAA 2205 0.39 MAKYNVILFFVFLALASKISLAYDVTENGDESRKLYIVYMGSLPKGASYSPTSHHINLLEQVIDDSDIQNCLVRSYKRSFNGFAAILNDQQRKKLVGMRGVVSVFPSPEYNLKTTRSWDFLGLPQSIKRDQTVENDLVIGVIDTGIWPESESFNDKGLGPIPRKWKGVCAGGGNFSCNKKIIGARFYDGIDESARDNIGHGSHTSSIAGGRDVEGVSFYGLAKGTARGGVPSSRIAAYKVCYEMKCIGASILAAFDDAIADGVDVITISMGYPTILDFVNDPVAIGSFHAMEKGILTTQSAGNSGPSPSSVISAAPWLFTVAATSIDRQFITKLILGNGKTFIGRSIYTGPSNGTKFPIARRNAKACPSGRNASPEMCDCLDKSMVKGKLVLCGAGGMLSSNTGIIGSIRNVTDSGFDVFSTTYKPSLNLKTKDFVQVQSYTNSTKYPVAEILKSGIFHDTNAPKVAIFSSRGPNPLVPEIMKPDISAPGVNILAAYSPLAESEDMNDKRKFKYNLLSGTSMACPHAAGVVAYVKSFHPDWSPAAIKSAIMTTAKPVKGTYVDLAGEYAYGSGNINPQQALHPGLVYDITKQDYVQMLCNYGYDENKIKQISGDNSSCHEAPERSLLKDINYPAMVIPVVPDNKPFHVKIHRTVTNVGFPNSTYKATLIHHNPKIKIKVEPKLLKFKSLHEKQSFVVTIIGGDKLNQTVFSSSLIWFDGTHRVKSPIIVQILPL 734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00029 734 Gene3D - 598 732 - -
Trre15g00029 734 Pfam Subtilase family 136 562 IPR000209 GO:0006508|GO:0008236
Trre15g00029 734 PRINTS Subtilisin serine protease family (S8) signature 134 153 IPR015500 -
Trre15g00029 734 PRINTS Subtilisin serine protease family (S8) signature 518 534 IPR015500 -
Trre15g00029 734 PRINTS Subtilisin serine protease family (S8) signature 196 209 IPR015500 -
Trre15g00029 734 Pfam Fibronectin type-III domain 629 729 IPR041469 -
Trre15g00029 734 Pfam Peptidase inhibitor I9 36 112 IPR010259 -
Trre15g00029 734 CDD Peptidases_S8_3 110 554 IPR034197 -
Trre15g00029 734 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 36 729 IPR045051 -
Trre15g00029 734 SUPERFAMILY Subtilisin-like 113 585 IPR036852 GO:0004252|GO:0006508
Trre15g00029 734 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 20 113 IPR037045 -
Trre15g00029 734 Gene3D - 327 459 - -
Trre15g00029 734 ProSiteProfiles Serine proteases, subtilase domain profile. 117 581 - -
Trre15g00029 734 Gene3D Peptidase S8/S53 domain 136 594 IPR036852 GO:0004252|GO:0006508
Trre15g00029 734 FunFam Subtilisin-like protease SBT1.5 136 336 - -
Trre15g00029 734 ProSitePatterns Serine proteases, subtilase family, serine active site. 519 529 IPR023828 -
Trre15g00029 734 CDD PA_subtilisin_like 334 452 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00029 Trre-Chr15 269227 273774 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g00029 30 729 Subtilisin-like Serine Gene Family AT3G46850 51.604 0.0 710
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00029 - - psat:127076787 930.243