Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00015 ATGGCTGCTTCTTTGCTCCATCCAAATCCAACTTGTATCACTACTACACTTAAACAACACCACCGAACATCAACAATATGCTTCTTCTATCCCTCCTCCTTAAAACCCACCAACATTCCACCGTACAATAATGTTCCTTTCTTAACTAATAATAACAACAATTACAATACAACAAAGTGTAATGCATTCTTTGATAACAACAATGTGCTCAACGGTTTGTTGGATGTTGGTGGGGAAAACTTTCCTGATTTCCTCCGATCATTTGAAGACTTATCATACATGCAGAGATGGGAGTCTCTTGTGTTTGGCAGTCTCATATGGATTTACTTAACTGCAAGACCAGGTGTTCTTATTGGTGCCATTGATGCTTACCTTCTTGCTCCTCTTCAACTTGCTTTTGACAATCTATCTGGTAGGAGAAACTTGAAGACCGCTGATTTTCTTGTTGGAAATAGAATCGGTGAAGGTTCCTTTGGTGTTGTTTATTCTGGTGTTTTAGTCCCTAAAAATGTCGAGGATGCAGCAGAGGTCACCAAGAACAAACTAACAACAACAACAACAACAACAACCAAATCTAAGGATAAAGTCATTCTCAAAAAGGTTAAGGTTGGGATTAAAGGGGCTGAAGAATTTGGTGAATTTGAGGAGTGGTTCAATTACAGACTATCTAGAGCAGCACCTGAAACATGTGCTGAGTTCCTTGGAAGTTTTGTTGCTGATAAAACTAACTCACAGTTCACAAAAGGTGGAAAATGGCTTGTTTGGAAATTTGAGGGAGATCTTACTCTTGGCGATTACATTAAAGACCGCAACTTCCCTTCAAACTTAGAATCTGTCATGTTTGGACGTGTGTTGCAAGGTGTCGATTCTTCCAGACGAAATGCTTTGATTATCAAGCAAATTATGCGCCAGATAATTACTTCTCTTAAGAAAATTCATGATACAGGCATTGTTCATAGAGATATAAAGCCAGCCAACTTAGTTGTTACTAAAAAGGGGCAGATTAAACTCATTGATTTCGGTGCAGCGACAGACCTTCGGATCGGAAAGAACTATGTTCCCGACCGCACCCTTTTGGATCCAGACTATTGCCCCCCAGAACTATATGTACTCCCAGAAGAAACACCGAGTCCTCCACCAGCACCAATTGCCGCCTTCTTTTCACCAATACTATGGCAGTTAAACAGCCCAGATCTTTTTGATATGTATTCTGCTGGGATTGTACTCCTACAAATGGCAATACCAACCTTAAGGTCTCCCGCTGCTTTGAAGAATTTCAATTTGGAAATTAAAACATGTGGTTATGATTTAAAAAAATGGAGGGAGTTTACTCGACTCAGGCCTGACTTCCAAATTCTTGACAGTGAATCTGGTAGAGGTTGGGACTTGGCAACAAAGCTTATCTCCGAGAGAGGTCCCTTAAGAAGAGGACGTTTATCTGCTGCTTCGGCTTTGAGACATCCTTATTTTCTTCTTGGAGGTGATCAGGCAGCTGCAGTTCTTTCAAAATTAAGTAGAAAGTGA 1524 0.4042 MAASLLHPNPTCITTTLKQHHRTSTICFFYPSSLKPTNIPPYNNVPFLTNNNNNYNTTKCNAFFDNNNVLNGLLDVGGENFPDFLRSFEDLSYMQRWESLVFGSLIWIYLTARPGVLIGAIDAYLLAPLQLAFDNLSGRRNLKTADFLVGNRIGEGSFGVVYSGVLVPKNVEDAAEVTKNKLTTTTTTTTKSKDKVILKKVKVGIKGAEEFGEFEEWFNYRLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDLTLGDYIKDRNFPSNLESVMFGRVLQGVDSSRRNALIIKQIMRQIITSLKKIHDTGIVHRDIKPANLVVTKKGQIKLIDFGAATDLRIGKNYVPDRTLLDPDYCPPELYVLPEETPSPPPAPIAAFFSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSPAALKNFNLEIKTCGYDLKKWREFTRLRPDFQILDSESGRGWDLATKLISERGPLRRGRLSAASALRHPYFLLGGDQAAAVLSKLSRK 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00015 507 ProSitePatterns Serine/Threonine protein kinases active-site signature. 317 329 IPR008271 GO:0004672|GO:0006468
Trre15g00015 507 ProSiteProfiles Protein kinase domain profile. 147 490 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre15g00015 507 Gene3D Transferase(Phosphotransferase) domain 1 288 492 - -
Trre15g00015 507 Pfam Protein kinase domain 297 490 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre15g00015 507 SMART serkin_6 147 490 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre15g00015 507 Gene3D Phosphorylase Kinase; domain 1 135 257 - -
Trre15g00015 507 PANTHER SERINE/THREONINE-PROTEIN KINASE STN8, CHLOROPLASTIC-RELATED 84 506 - -
Trre15g00015 507 SUPERFAMILY Protein kinase-like (PK-like) 143 491 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00015 Trre-Chr15 174129 175950 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g00015 298 490 PP2C-type Phosphatase Gene Family AT3G63340 23.552 9.85e-10 58.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-4 Trre15g00015 Pkinase 8.7e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00015 - - psat:127120955 727.243
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g00015 15 174129 175950 Trre13g01851 13 15762039 15764982 PCT