Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00014 ATGAGAGGTGTGCTATCTGTGTTTCCAAGCCAAAAGTTTCACCTACAAACGACAAGATCGTGGAACTTCCTTGGATTTCCTCAATCAATCAAAAGAGATCAAACTATTGATAGCAATTTGGTGATTGGAGTCATAGACAGCGGAATCTGGCTAGAATCTGAATGTTTCAATGACAAAGGTCTTGGTCCCATTCCGAAAAAGTGGAAGGGAGTTTATGCAGACAGTGGTAACTTCAGTTGCAACAACAAGATCATTGGAGCACGATCTTACAATGTTAAAGAAGAGAGTGCAAGAGACTATGGTGGTCATGGAACCCACACAGCACCAACAACAAGTGGAAGAGAGGTGAATGATATAAACTTTTATGAGTTCCATCTTCAAGGACCGCTGTATACAAAATATGCAACGCGAATGGCGGTGGGAAATTATGGTCCTGACCCAAGTAGTGTTTTTAGTGTAGCATCTTGGTTATTTAGCGTTGTTGCAACTTGCATAGATTGTCAATTTATTGATAAGTCCGTTCTTGGAAATGGAAAGACTTTAATTGGTAAGTCAATCAATACCATCCCTTCAAATGGCACAAAATTTCCAATAGTGGTGTGTAACACTCAAGCTTGCTTGGGAGAGTATACATCCCCTGGAATGTGTACATGTATAGACAAAAAACTTGAGAAGGGTAAACTTGTTTTGTGTGGAGCACCAGGGGTTGAGAGATTTGCTTATGCAAATGGTGCAATTGGTTCAATCATTCATGTTACACACTCACATAATGATGCGTCTTTAATCACTTCGATGCCTTCACTTAACTTGGATACAGATGACTATGTTCTTGTTGAATCTTACGCAAACTCCACTAAATACCCTGTAGCTGAAATTTTGAAGAGTGAGATATTTCATGACAACAATGCTCCTAGAATTGCCAGTTTCTCTTCTCGTGGCCCAAATCCTCTGGTTCCAGAAATTATGAAACCAGATATAAATTGGTCACTTGCAACTATCAAATCTGCCATAATGACTACGACAAGACTGGTGAATGGTACTTATAATGATATGGTGGGTGAGTTTGCTTATGGATATGGGAATGTCAATCCACAACAAGCCATTGACCCTGGACTTGTTTATGACATCAATAAGCAAGATTATGTGCAAATGCTTTGTAATTATGGTTATGATGCTGACAAAATTAAACTGATTAGTGGAGATAATTCAAGTTGCCAAGGAGATTCGAATAGATCATTTGTGAAAGATATAAACTATCCTGCACTTGTGATTCCTATTGAGCCTAATAAACTTTTGAATGTCAAGATTAATAGAACAGTTACAAACATTGGCTCTCTCACCTCAACCTACAGGGCTACTGTCTTCCCAATACCAAAAATCAAGATTAGCGTGGAACCAAAACTTCTCTCATTCAAGTCATTAAATGAGAAACAATCATTTATCGTCACTGTTGTTGGGGGAGAAGAATTAAACGAAAATATGTTTTCCACATCCCTTATTTGGCCAGATGGCTCCCACAATGCGAAGAGTCCAATCATTGTGCAATGTCTATCCTAA 1557 0.3866 MRGVLSVFPSQKFHLQTTRSWNFLGFPQSIKRDQTIDSNLVIGVIDSGIWLESECFNDKGLGPIPKKWKGVYADSGNFSCNNKIIGARSYNVKEESARDYGGHGTHTAPTTSGREVNDINFYEFHLQGPLYTKYATRMAVGNYGPDPSSVFSVASWLFSVVATCIDCQFIDKSVLGNGKTLIGKSINTIPSNGTKFPIVVCNTQACLGEYTSPGMCTCIDKKLEKGKLVLCGAPGVERFAYANGAIGSIIHVTHSHNDASLITSMPSLNLDTDDYVLVESYANSTKYPVAEILKSEIFHDNNAPRIASFSSRGPNPLVPEIMKPDINWSLATIKSAIMTTTRLVNGTYNDMVGEFAYGYGNVNPQQAIDPGLVYDINKQDYVQMLCNYGYDADKIKLISGDNSSCQGDSNRSFVKDINYPALVIPIEPNKLLNVKINRTVTNIGSLTSTYRATVFPIPKIKISVEPKLLSFKSLNEKQSFIVTVVGGEELNENMFSTSLIWPDGSHNAKSPIIVQCLS 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00014 518 Gene3D - 166 299 - -
Trre15g00014 518 CDD PA_subtilisin_like 174 292 - -
Trre15g00014 518 Pfam Fibronectin type-III domain 416 514 IPR041469 -
Trre15g00014 518 Gene3D - 385 517 - -
Trre15g00014 518 SUPERFAMILY Subtilisin-like 3 398 IPR036852 GO:0004252|GO:0006508
Trre15g00014 518 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 138 326 IPR045051 -
Trre15g00014 518 Gene3D Peptidase S8/S53 domain 138 326 IPR036852 GO:0004252|GO:0006508
Trre15g00014 518 Gene3D Peptidase S8/S53 domain 328 381 IPR036852 GO:0004252|GO:0006508
Trre15g00014 518 Gene3D Peptidase S8/S53 domain 40 124 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00014 Trre-Chr15 171192 173405 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g00014 1 514 Subtilisin-like Serine Gene Family AT5G59130 36.293 1.94e-112 348
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00014 - - psat:127076787 409.068