Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g05276 ATGGCTCCTTCAACAACTGAATCCAATAAACAACAAATCCCCAACGGAAAAGACAATCATCTAAAACCACAACAACAAGAAGAAGATGATGATGCCCTCGAATTTGCCACACAAATAACAGGTTCCATTGTTGTTCCATTGGCTTTGAGGTCAGCCATTGATCTTGGCATCTTTGACATCCTAGCCAAAGCTGGCGAAGGTGCAGAACTCTCTGCACAAGACATTGCTGTTAAGATTGGAACCAACAACCCGGAAGCACCAACAATGTTGAATCGTCTTCTTAGGTTGTTGGCCAGTCACTCTATTCTAAACTCCTCTGTTCCTCAACAACATGATGATCAACAAATATTCTACAGCCTCTCCAATCGCTCCAAATATTTTGTCACCGATGCTGATGGCATCTCGTTGGGACCCACCTTGGCATTACTTCTCGACAATGTCTTCTACCAAAGCTGGTCGGAGCTGAAAGGAGCGATAGTGGAAGGAGGAATACCGTTCAATAGAGTATATGGAATGCATGCCTTTGAGTACCCACGTGTGGATCCAAGGTTCAATGATGTTTTCAACAAAGCTATGCTTAGTTCAACCACTATTAATATGAAGAGAATTCTTGAATTTTATCAAGGTTTTGAGCATGTCACTAAGTTGGTTGACGTTGGTGGTGGTCTTGGACATAACCTCAAATTGATCACAGCCAAATATTCTCATATTCATGGAATTAATTTTGACTTGCCTCATGTGCTACAAAATGCTCCTAACTACCCAGGTGTTGAACACGTGGGAGGAGATATGTTTGAGAGCGTTCCTACAGGGGATGCCATTTTTATGAAGTGGATACTTCATGATTGGAGTGATGAACACTGCTTGAAGCTGTTGAAAAATTGTTACAAAGCTATTCCTGAGAATGGAAAGGTTATTGTTGTGGACACAATCCTTCCCACCACGCCCGAGACAACAGGGAGCGCAAAGTTTGGTTTCTCGTCTGATCTTTTAATGATGACTCAAAATCCAGGAGGAAAAGAGAGAACTGAGCAGGAATTCATAAAATTGGCAAAAGGATCTGGATTCAGTGGCATCAAACCTATATGTTGTGTGTCTGGACTATGGGTTATTGAGTTCTTTAAGTAG 1128 0.4184 MAPSTTESNKQQIPNGKDNHLKPQQQEEDDDALEFATQITGSIVVPLALRSAIDLGIFDILAKAGEGAELSAQDIAVKIGTNNPEAPTMLNRLLRLLASHSILNSSVPQQHDDQQIFYSLSNRSKYFVTDADGISLGPTLALLLDNVFYQSWSELKGAIVEGGIPFNRVYGMHAFEYPRVDPRFNDVFNKAMLSSTTINMKRILEFYQGFEHVTKLVDVGGGLGHNLKLITAKYSHIHGINFDLPHVLQNAPNYPGVEHVGGDMFESVPTGDAIFMKWILHDWSDEHCLKLLKNCYKAIPENGKVIVVDTILPTTPETTGSAKFGFSSDLLMMTQNPGGKERTEQEFIKLAKGSGFSGIKPICCVSGLWVIEFFK 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g05276 375 FunFam Caffeic acid 3-O-methyltransferase 14 127 - -
Trre14g05276 375 MobiDBLite consensus disorder prediction 1 20 - -
Trre14g05276 375 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 133 373 IPR029063 -
Trre14g05276 375 Gene3D - 15 127 IPR036388 -
Trre14g05276 375 Gene3D Vaccinia Virus protein VP39 128 375 IPR029063 -
Trre14g05276 375 Pfam O-methyltransferase domain 152 357 IPR001077 GO:0008171
Trre14g05276 375 PANTHER O-METHYLTRANSFERASE 39 356 IPR016461 GO:0008168
Trre14g05276 375 Pfam Dimerisation domain 48 98 IPR012967 GO:0046983
Trre14g05276 375 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 37 375 IPR016461 GO:0008168
Trre14g05276 375 FunFam Caffeic acid O-methyltransferase 128 375 - -
Trre14g05276 375 PIRSF O-mtase 15 375 IPR016461 GO:0008168
Trre14g05276 375 MobiDBLite consensus disorder prediction 1 30 - -
Trre14g05276 375 SUPERFAMILY "Winged helix" DNA-binding domain 27 130 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g05276 Trre-Chr14 58272795 58274423 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g05276 18 375 Monolignol Biosynthesis Gene Families AT5G54160 53.203 4.69e-138 396
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g05276 K13066 - gmx:100789402 510.375