Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g05267 ATGAATGGTTTTAGTGCAAGTTTGTCTCCTTTGGAGCTTGAGGCTCTAAAAAGCACTGCCGGATATATTTCATCCATAAAGGATTTACCTATCAAACCAGACACAACACACTCTCCTCAATTCATTGGCCTCAATCCTATTTCAGGAACATGGCCTAGAACACAATACGGTAAAAATGTTATAATTGGTATGATAGACAGTGGAATTTGGCCAGAAAGTGAAAGCTTTAAAGATGATAATATGCCTAACATCCCTTCGCGGTGGAAAGGTCAATGTCAAAATGGTACTCAATTTGACTCTTCATTGTGCAACAAAAAACTCATAGGAGCTCGATTCTTCAACAAAGGAGTGCTAGCAAATAATCCTAATATCAAAATAACTATGAACTCCACACGCGACATAGACGGTCATGGCACCCACACATCAACCACTGCCGCTGGAAGAAAAGTTGAAGGTGCATCCTACTTTGGATATGCCTCCGGATCAGCCATAGGCATTGCTCCACATGCTCATGTATCCATGTACAAGGTATTGTGGAAAGAAGGAGCATATGTATCTGATACAATAGCTGCAATTGATAGTGCAATAGAAGATGGTGTAGATGTTCTTTCATTATCATTGGGTTTTGACGAGGCACCTTTGTATGAAGACCCTATAGCTATAGCCACATTTGCAGCTATGGAGAAAAACATTTTTGTATCTACATCTGCAGGGAACAGAGGGCCAATGCTTGAAACTCTGCACAATGGAACACCATGGGTAATAACTGTGGCTGCTGGCACATTGGACCGTGAATTTCAAGGCGATTTAAAACTTGATAATGGATCCATAGTCACTGGTTTGTCTCTCTATCCAGCGAATTTTTCTTCAGCAAAGGTTCCAATGGTTTTCATGAGCTCATGTGATAATTTGACGGAACTCATTAAAGCGAGAAACAAAATCGTGGTGTGTGAAGACAAGAATAGAACACTTGGTACTCAAGTAGATAACTTGGACAGAGCAAAAGTTATCGGAGGTGTTTTCATATCAAATAGTAATGACGATATTACGTATTACATTCAAACTAAATTTCCATCAATATTTTTGAATCCAATGAATGGAGAACTAGTCAAGGATTACATCAAATGCAACTATAGTAATCCAAAAGCAAGCATGACATTTAAGAAAACTATTTTAGGTACAAAACCAGCACCAATTGTGGATAGTTATAGTTCCAGAGGACCATCACATAGTTGTCCATTTGTGTTAAAACCAGACATCACAGCACCAGGAACACTAATCTTAGCTTCATGGCCTCAAAATGTTCCAGCAACAGAATTGCAATTCCAAAACAATCTCTTCAGCAACTTCAACTTGTTAAGTGGAACATCAATGTCATGTCCACACATTGCAGGTGTAGCAGCACTTTTAAAAGAAGCACACCCTAGTTGGAGTCCTGCAGCCATTAGATCAGCAATCATGACAACCTCAGACATATTAGACAACACAAAGGAACTCATCAAAGATGTTGGTAATGATTGCAAACCAGCTTCACCTCTAGCATTGGGGGCTGGCCATGTTAACCCCAATAGAGCACTTGATCCCGGACTTGTTTATGATGCGGGAAAACAAGACTATGTGAATCTTCTATGTGCATTAAATTTCACTCAAAAGAACATCATTGCTATCACAAGATCATCTTCTAACAATTGCTCTAAACCTTCTCTAGACCTTAATTACCCATCTTTTATTGCCTTTTTCAAAACTGATAGTTTTGAGTCAAATGTATTTACACAAGAATTTCAAAGAGTAGTAACCAATGTTGGGGAGGATTCAACTATCTATGTAGCTAACATTACACCAATTGAAGGGTTCCACGTTAGTGTTATCCCTAACAAGTTGGTGTTTAAGGAGAAAAATGAAAAGGTGACATACAAGTTGAGGATAGAAGGTCTCAAAATGGAGAAAAATAAAGTAGCTTTTGGGTATATTACTTGGACAGACTCAAAACACGTTGTTAGAAGTCCCATTGTTGTGACAAGTCTCACCTCAGAACTAACACCCCCATAG 2049 0.3885 MNGFSASLSPLELEALKSTAGYISSIKDLPIKPDTTHSPQFIGLNPISGTWPRTQYGKNVIIGMIDSGIWPESESFKDDNMPNIPSRWKGQCQNGTQFDSSLCNKKLIGARFFNKGVLANNPNIKITMNSTRDIDGHGTHTSTTAAGRKVEGASYFGYASGSAIGIAPHAHVSMYKVLWKEGAYVSDTIAAIDSAIEDGVDVLSLSLGFDEAPLYEDPIAIATFAAMEKNIFVSTSAGNRGPMLETLHNGTPWVITVAAGTLDREFQGDLKLDNGSIVTGLSLYPANFSSAKVPMVFMSSCDNLTELIKARNKIVVCEDKNRTLGTQVDNLDRAKVIGGVFISNSNDDITYYIQTKFPSIFLNPMNGELVKDYIKCNYSNPKASMTFKKTILGTKPAPIVDSYSSRGPSHSCPFVLKPDITAPGTLILASWPQNVPATELQFQNNLFSNFNLLSGTSMSCPHIAGVAALLKEAHPSWSPAAIRSAIMTTSDILDNTKELIKDVGNDCKPASPLALGAGHVNPNRALDPGLVYDAGKQDYVNLLCALNFTQKNIIAITRSSSNNCSKPSLDLNYPSFIAFFKTDSFESNVFTQEFQRVVTNVGEDSTIYVANITPIEGFHVSVIPNKLVFKEKNEKVTYKLRIEGLKMEKNKVAFGYITWTDSKHVVRSPIVVTSLTSELTPP 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g05267 682 PRINTS Subtilisin serine protease family (S8) signature 133 146 IPR015500 -
Trre14g05267 682 PRINTS Subtilisin serine protease family (S8) signature 454 470 IPR015500 -
Trre14g05267 682 PRINTS Subtilisin serine protease family (S8) signature 57 76 IPR015500 -
Trre14g05267 682 ProSiteProfiles Serine proteases, subtilase domain profile. 41 526 - -
Trre14g05267 682 CDD Peptidases_S8_3 32 491 IPR034197 -
Trre14g05267 682 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 1 672 IPR045051 -
Trre14g05267 682 Gene3D - 543 676 - -
Trre14g05267 682 ProSitePatterns Serine proteases, subtilase family, serine active site. 455 465 IPR023828 -
Trre14g05267 682 Gene3D Peptidase S8/S53 domain 59 539 IPR036852 GO:0004252|GO:0006508
Trre14g05267 682 Pfam Fibronectin type-III domain 570 672 IPR041469 -
Trre14g05267 682 SUPERFAMILY Subtilisin-like 34 530 IPR036852 GO:0004252|GO:0006508
Trre14g05267 682 Gene3D - 263 392 - -
Trre14g05267 682 CDD PA_subtilisin_like 269 384 - -
Trre14g05267 682 FunFam Subtilisin-like protease SBT1.5 59 271 - -
Trre14g05267 682 Pfam Subtilase family 57 495 IPR000209 GO:0006508|GO:0008236
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g05267 Trre-Chr14 58218312 58220696 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g05267 1 678 Subtilisin-like Serine Gene Family AT5G67090 46.628 0.0 605
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g05267 - - psat:127132069 1183.32