Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g05257 ATGGAAAGATCAACCATAGAGATGGGAAGTGATGAGAAAAGTGTGCTTTCGTTTCTTCTGCATGGGAAGAAGCAAGAGTTCAGAGATGTACCAAAAGGGTGTCTTGCAATCAAGGTTGGTCAAGGAGAAGATCAACAGAGATTCGTGGTGCCAGTGATATACTTCAATCATCCACTTTTCATGCAACTTCTCAAAGAAGCAGAGGAAGAATATGGATTTGATCATAAAGGACCCATAACCATTCCATGTCATGTTGAAGAATTTAGAAACATTAGAGGTTTGATTGATAGGGAAAAGTCTCTTCATAACAACCATCATGTTAGATGTTTTGGCTTCTGA 339 0.3894 MERSTIEMGSDEKSVLSFLLHGKKQEFRDVPKGCLAIKVGQGEDQQRFVVPVIYFNHPLFMQLLKEAEEEYGFDHKGPITIPCHVEEFRNIRGLIDREKSLHNNHHVRCFGF 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g05257 112 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 20 90 IPR003676 GO:0009733
Trre14g05257 112 Pfam Auxin responsive protein 25 91 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g05257 Trre-Chr14 58151683 58153584 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g05257 29 96 Calmodulin-binding Proteins AT3G43120 51.471 3.06e-18 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g05257 K14488 - pvy:116108881 177.948