Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g05256 ATGTTAGGAAGAAGCTATAGACAAGTTCAGCAGCACCACCACCACCATGGAAGAACAAAAGATATACCAAAAGGGTGTGTTGCAATAAAGGTGGGTCATGGTGAAGAGCAACAAAGATTTATTGTACCACTGAATTACCTGAATCATCCACTCTTTGTTGGGCTTCTGAAGGAGGCAGAGGAAGAGTATGGTTTTTCTCAGCAGGGTACTATAATCATCCCTTGTCAATTGGAGGAGTTTAAGGATATTCTTCAACACATGATTCATATTGATGATATTAATAATAAGTCCATCCAACACCAACATCACCACCTCGTTGGCTGCTTCAGAGCTTGA 336 0.4077 MLGRSYRQVQQHHHHHGRTKDIPKGCVAIKVGHGEEQQRFIVPLNYLNHPLFVGLLKEAEEEYGFSQQGTIIIPCQLEEFKDILQHMIHIDDINNKSIQHQHHHLVGCFRA 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g05256 111 MobiDBLite consensus disorder prediction 1 21 - -
Trre14g05256 111 Pfam Auxin responsive protein 16 85 IPR003676 GO:0009733
Trre14g05256 111 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 16 83 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g05256 Trre-Chr14 58148051 58148386 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g05256 21 101 Calmodulin-binding Proteins AT5G20810 45.977 1.02e-19 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g05256 K14488 - mnt:21406213 133.65