Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g05249 ATGGATACTTTCTCAACCTCTGTTTCAACCCTTAAAATCTCATCACTTCCACCACCATCAACAAATCACTTCACAAGAAACACCCCTCATGCAATCTCTCCACGACCCAAACCCCATTTCTCTTCCACTTCCAAACCCAACAGCATAGCCACACAAAAAACCAAACCTTTCTCTCACAATAATAATAACCCTTCTCCTTCTCTACCATTCTCTTCCTCAAACACCTGCAAACCATCTTCTCCAATATTCCATCACACTCCTGCTACTGGCTATGCTGCTGCAATCATAGATGTAGCTCAAAAAACCAATACCCTTTACCCAGTTCAAAGGGATGTTCATAGACTCTTGAAATTCCTCAAAATATTGAAATTTCAATCAGATGCTGGTGGTGCTGTTGTTGACCCTTCAGCGATAAGGAGGATAGTTGAACAGGGAAATTTTCAAAGGCAAGTGGTTGTTTTGGTGAAGATGCTAATGAAGAAGAACAAGTTGGGAATTGTTGAACAAGTGTTGGAAGAGTTCGTGAGGATTTATGATGAGCTGTGTGGAACTCAAGTTGTATTGGTTTCATCAAAAAGAGAGATTGGGAAAGATGAAATGTTTGGGATTGCGAAAAGTGTGCACAAACTCAATGGAGCAGTGAGGGTTAGGGTTAGGAATTTGGTTCAACAGAGTTTTCCTTCTTTTGTTTGCAATGTAAAACAGTCTCAAAAATCATGA 720 0.4014 MDTFSTSVSTLKISSLPPPSTNHFTRNTPHAISPRPKPHFSSTSKPNSIATQKTKPFSHNNNNPSPSLPFSSSNTCKPSSPIFHHTPATGYAAAIIDVAQKTNTLYPVQRDVHRLLKFLKILKFQSDAGGAVVDPSAIRRIVEQGNFQRQVVVLVKMLMKKNKLGIVEQVLEEFVRIYDELCGTQVVLVSSKREIGKDEMFGIAKSVHKLNGAVRVRVRNLVQQSFPSFVCNVKQSQKS 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g05249 239 MobiDBLite consensus disorder prediction 1 74 - -
Trre14g05249 239 Pfam ATP synthase delta (OSCP) subunit 89 225 IPR000711 GO:0015986|GO:0046933
Trre14g05249 239 MobiDBLite consensus disorder prediction 37 74 - -
Trre14g05249 239 MobiDBLite consensus disorder prediction 1 29 - -
Trre14g05249 239 PANTHER ATP SYNTHASE DELTA CHAIN 71 227 IPR000711 GO:0015986|GO:0046933
Trre14g05249 239 Gene3D - 84 181 IPR026015 -
Trre14g05249 239 SUPERFAMILY N-terminal domain of the delta subunit of the F1F0-ATP synthase 88 181 IPR026015 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g05249 Trre-Chr14 58131044 58131763 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g05249 67 226 Primary Pumps ATPases AT4G09650 26.829 1.47e-12 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g05249 - K02113 gmx:100526851 217.238