LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Trre14g05217	ATGGATATCTTAAAGTTCCTCTTTCACTTGTTCATATTATTTCCTGTCATATATACCTCACAAATCTATTGTCAAGATTCTAGGTGCAGTAATAAGGATACCTTCTTTATTCGTTTCCCTTTCCAATTAGAAGTAGAAAGTGATCAACATCCTTATTGTGGTTATTCCGGTTTCAAATTAACATGTACTAAAGATAACCAAACAGTTCTAACACTTCCTTATTCGGGCGTGTTCAATGTTCGCAGTATCAACTATCGCAGACAACAGATACAAGTCTATGACCCACATCATTGCCTTCTAAATCGTCTTCTAAGCCTCAACCTTTCAGGTTCACCTTTCTTTACCGAATTTCTTACTAACTACACTCTCTTAAGCTGCACAACTCGGAACATAGGATTTCAGGTCTATCAAGTTGACTGTCTTAGCAATTTTACACATTTTGTATCAGTTATTCCTTCAGCGAGCTTCACCGACTCTTTGCCTCAGTCTTGCTATATTATTAGAAATCTATCAGTTCCAGTTCCAAGATTTTATCATGAATTCTTCTTAGACAGCCTCAGTGAAGATCTTGAACTAACATGGTCTTCACCGGATTGTAGATATTGTGAATCACAATATGATATGTGCAGATTCGAGAGCAGAAATAGTGATCAAGTTCATTGTTTCTCTATTAACGAAACAGGTCATTCAAAACATGGGTATAAAATCATCATATTTTCTATTATAGGAATAGCTATGATGTGTGCAATTGGTATTGGGTGCTTAAAGAGATTCAAGCGCGGAAGGACAGTATCAACCGAACCAGCCATTACCAGTAACACTTCAAGGACGGAGGAGGGTATGGATGAGTCGGATGTTGCTCAATATACCTCTCAGAGTACAACATCAAGGACATAA	897	0.3735	MDILKFLFHLFILFPVIYTSQIYCQDSRCSNKDTFFIRFPFQLEVESDQHPYCGYSGFKLTCTKDNQTVLTLPYSGVFNVRSINYRRQQIQVYDPHHCLLNRLLSLNLSGSPFFTEFLTNYTLLSCTTRNIGFQVYQVDCLSNFTHFVSVIPSASFTDSLPQSCYIIRNLSVPVPRFYHEFFLDSLSEDLELTWSSPDCRYCESQYDMCRFESRNSDQVHCFSINETGHSKHGYKIIIFSIIGIAMMCAIGIGCLKRFKRGRTVSTEPAITSNTSRTEEGMDESDVAQYTSQSTTSRT	298

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Trre14g05217	298	PANTHER	RING/U-BOX SUPERFAMILY PROTEIN	3	291	IPR046948	-
	Trre14g05217	298	MobiDBLite	consensus disorder prediction	269	298	-	-
	Trre14g05217	298	Pfam	Wall-associated receptor kinase galacturonan-binding	24	94	IPR025287	GO:0030247
	Trre14g05217	298	MobiDBLite	consensus disorder prediction	284	298	-	-
	Trre14g05217	298	Pfam	Wall-associated receptor kinase C-terminal	180	223	IPR032872	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Trre14g05217	Trre-Chr14	57925928	57926938	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Trre14g05217	24	222	C3H Transcription Factor Family	AT2G46495	40.196	3.13e-38	136

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Trre14g05217	-		-	tpra:123889576	345.895