Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g05217 ATGGATATCTTAAAGTTCCTCTTTCACTTGTTCATATTATTTCCTGTCATATATACCTCACAAATCTATTGTCAAGATTCTAGGTGCAGTAATAAGGATACCTTCTTTATTCGTTTCCCTTTCCAATTAGAAGTAGAAAGTGATCAACATCCTTATTGTGGTTATTCCGGTTTCAAATTAACATGTACTAAAGATAACCAAACAGTTCTAACACTTCCTTATTCGGGCGTGTTCAATGTTCGCAGTATCAACTATCGCAGACAACAGATACAAGTCTATGACCCACATCATTGCCTTCTAAATCGTCTTCTAAGCCTCAACCTTTCAGGTTCACCTTTCTTTACCGAATTTCTTACTAACTACACTCTCTTAAGCTGCACAACTCGGAACATAGGATTTCAGGTCTATCAAGTTGACTGTCTTAGCAATTTTACACATTTTGTATCAGTTATTCCTTCAGCGAGCTTCACCGACTCTTTGCCTCAGTCTTGCTATATTATTAGAAATCTATCAGTTCCAGTTCCAAGATTTTATCATGAATTCTTCTTAGACAGCCTCAGTGAAGATCTTGAACTAACATGGTCTTCACCGGATTGTAGATATTGTGAATCACAATATGATATGTGCAGATTCGAGAGCAGAAATAGTGATCAAGTTCATTGTTTCTCTATTAACGAAACAGGTCATTCAAAACATGGGTATAAAATCATCATATTTTCTATTATAGGAATAGCTATGATGTGTGCAATTGGTATTGGGTGCTTAAAGAGATTCAAGCGCGGAAGGACAGTATCAACCGAACCAGCCATTACCAGTAACACTTCAAGGACGGAGGAGGGTATGGATGAGTCGGATGTTGCTCAATATACCTCTCAGAGTACAACATCAAGGACATAA 897 0.3735 MDILKFLFHLFILFPVIYTSQIYCQDSRCSNKDTFFIRFPFQLEVESDQHPYCGYSGFKLTCTKDNQTVLTLPYSGVFNVRSINYRRQQIQVYDPHHCLLNRLLSLNLSGSPFFTEFLTNYTLLSCTTRNIGFQVYQVDCLSNFTHFVSVIPSASFTDSLPQSCYIIRNLSVPVPRFYHEFFLDSLSEDLELTWSSPDCRYCESQYDMCRFESRNSDQVHCFSINETGHSKHGYKIIIFSIIGIAMMCAIGIGCLKRFKRGRTVSTEPAITSNTSRTEEGMDESDVAQYTSQSTTSRT 298
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Trre14g05217 298 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 3 291 IPR046948 -
Trre14g05217 298 MobiDBLite consensus disorder prediction 269 298 - -
Trre14g05217 298 Pfam Wall-associated receptor kinase galacturonan-binding 24 94 IPR025287 GO:0030247
Trre14g05217 298 MobiDBLite consensus disorder prediction 284 298 - -
Trre14g05217 298 Pfam Wall-associated receptor kinase C-terminal 180 223 IPR032872 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Trre14g05217 Trre-Chr14 57925928 57926938 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g05217 24 222 C3H Transcription Factor Family AT2G46495 40.196 3.13e-38 136
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g05217 - - tpra:123889576 345.895