Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g05205 ATGAAGGATTGCGGTGCATATTGCGAATGTCCAAACTGTCATTATCGTATAGACAACAGCGATGTTTCGTGGCCTGGCCTTCCTCTTGGTACAAAGTTTGATCCTTCTGATGTAGAACTATTGGAACATTTAGCAGCTAAATGTGGTGTTGGGAACAGAGAGCCTCACATGTTTATTGAAGAGTTCATCCCAACATTGGAAGGAGACCAAGGCATTTACTATACACATCCTGAAAATCTTCCAGTTTGTTATCCTGAGGAAAGAGTTCAAAAGAGCTGCTTCGACATAATATTCACCACACCAGTCTTTTTTGCCACCATTCATGATCTCTCTTCAAATATATTACTAACAAGATATAGTTAA 363 0.3939 MKDCGAYCECPNCHYRIDNSDVSWPGLPLGTKFDPSDVELLEHLAAKCGVGNREPHMFIEEFIPTLEGDQGIYYTHPENLPVCYPEERVQKSCFDIIFTTPVFFATIHDLSSNILLTRYS 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g05205 120 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 3 82 IPR044799 GO:0003700
Trre14g05205 120 SUPERFAMILY NAC domain 15 84 IPR036093 GO:0003677|GO:0006355
Trre14g05205 120 Pfam No apical meristem (NAM) protein 28 87 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g05205 Trre-Chr14 57887426 57888994 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g05205 10 90 NAC Transcription Factor Family AT1G28470 46.591 5.74e-19 78.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g05205 - - gmx:100780442 152.14