Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g05195 ATGCTCAACCATTGGCCTAATGTTCAAGAAGAAAATAAGACAATTGATGGTAACATGAAGGATTCTCATTCTTCTTTTACAAATGAAAGTCCCAACAGTGAGATTATTATTAAGCACAAAGCTCTCTTCAAGAAAAGGAAGAGCATGCCAACATGGAAAGAGCAAGTGAAGATTTGCACAAACACAGGATTGTTTGAAGGGTCTTTGGATGATGAATATAGTTGGAGAAAATATGGTCAAAAGGATATTCTTGGAGCTAAGTTTTCAAGAGGATATTATAGATGCACACATAGAAATGAACAAGGGTGCCTAGCAACAAAGCAAGTTCAAAGGTCAGATGAAGATCCAACAATAATCGAGGTTACTTACAGAGGAAGACACACATGCTCTCAATCTAAGCCTTCAAAAAAGGATTTTCCCTCAAAATTAAAGATAATAAATACATCAAAGAGTGATAAAAAGAATCAACTACAACAAACACAAGAGGCTAGTTTCACTTTGCAAGCAAAACTTGATGTGAAAAGAATGAATTTAGAAGAAACCAAAGAAGATATCTTCCCTTGGTTTTGTTTTTCTTCTCCATCAATTGAATCAGAAAATGAGAAAATGAGAAAATGA 618 0.343 MLNHWPNVQEENKTIDGNMKDSHSSFTNESPNSEIIIKHKALFKKRKSMPTWKEQVKICTNTGLFEGSLDDEYSWRKYGQKDILGAKFSRGYYRCTHRNEQGCLATKQVQRSDEDPTIIEVTYRGRHTCSQSKPSKKDFPSKLKIINTSKSDKKNQLQQTQEASFTLQAKLDVKRMNLEETKEDIFPWFCFSSPSIESENEKMRK 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g05195 205 SMART WRKY_cls 69 131 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre14g05195 205 FunFam WRKY transcription factor 53 54 132 - -
Trre14g05195 205 SUPERFAMILY WRKY DNA-binding domain 68 131 IPR036576 GO:0003700|GO:0006355|GO:0043565
Trre14g05195 205 Gene3D WRKY domain 55 132 IPR036576 GO:0003700|GO:0006355|GO:0043565
Trre14g05195 205 ProSiteProfiles WRKY domain profile. 69 127 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre14g05195 205 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 22 177 IPR044810 GO:0003700
Trre14g05195 205 Pfam WRKY DNA -binding domain 70 129 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre14g05195 205 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g05195 Trre-Chr14 57823080 57824165 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g05195 44 134 WRKY Transcription Factor Family AT4G11070 72.527 7.14e-41 138
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Trre14g05195 WRKY 3.4e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g05195 - - mtr:11429817 301.212