Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g05192 ATGGAGACGACTCAGTCGACGGAACACACAGCATCGCAGCATGACGACACACAGATGGACAACTCTGATGAATTTTCAGATGTTAATTTCAATGAGGATGAAGATGATGAACATTCGGCTTCTGCCGAAGAAAGTGAAAGTATAGAGCATACAGACCACAATATATGTGATGATAACATTGAGAATTCTGATTCTGTTGTAATAGATGGTAGGTTTGTTAGGATTAATACCATGACGGCAAATGATATTGAGGGTCTTGATTTTGGTAGTGAAAAAGAAGCTTATGACTTTTATGTAAAGTATGCAAAATGCACCGGTTTTGTTGTCAGGAAAGATTTTGTGAACAAAAATGTTAGGGGAACGATTGTAGCGCGACAATTTGTGTGCAACAAACAAGGAGTAAGAAGCAAAAAACACTTGGAGAGGGTTGATAGGAAAAGAGATCATAGACCTGTCACCCGAATTAATTGTGATGCCCACCTTCGTATACATTATAATGTAGAGAGGTTGATATGGGAAGTGACTGCTTTTGAACCGCGACATAACCATGAACTAACACCGTCTAAATTTATACATTTATTTCCTGCCTACCGTGGAATGACTGATGCCGACAAAGCTCAAATTGATAGCCTGCATTCGAATGCATTGAGAAGTAGTGTTAGGACTCAAAATTCAGAAATGGACAAACATATTGGAGATCCCGATGCTGTTAATTCTAAAGGTGCTCCGAAGAAAAATTTTAGGTTGAAAAGGACTAAGCACCGTTCAAAGTGTACTGACACTAAACACGATGTCAGGACATGTCCTATACGTATTGATGTAAATGGATCGCTAATAGACAATGACAAAGATGCTGCCAAATTTAGCAAGGCAACATGCAAATCTGACACAGAAATGTCTAGAAGCGATGTAAACAACATTCATGGTTCTGTAAGATCAACAAAGAGTGGAAGAGAAATTGATAAAAATGCGAAAGAAAAAAGTAATTACAATACGAAGCAGAAAAAGGTAAAAGAGATGAATGGAACTAACCATCACATTGGAGGTGAGCCTATGATGTCGCAAGTGCAGCCAAATGCACACCAAATGCATTATCCAACGCCTCATTTTGCCAATTCAAGCCAAGTACCTCCTCATATTTATGCTGTAAATGGTCAAACTCCACCCATAGGAGGTCTGCATACGATGTCCCAACTGCAGCCAAATGCACACCAAATGCTCTATGCAACGCCTAATTTTGCCAATTCAAGCCAAGTACCTGCTCCTACTTTTGTTATAGATGGTCAAACTCCTCCTATTTTACAACAACCACCACAGTACTTTTTTGGAATGCCGGCAACTAGTTATGGGTCATCTTGTCTTAATTTGCTCCAACAAGTCACGAACAAAGGAGGACAATCTAGCGGAAAGAATGTCCGGCCGTAA 1425 0.3972 METTQSTEHTASQHDDTQMDNSDEFSDVNFNEDEDDEHSASAEESESIEHTDHNICDDNIENSDSVVIDGRFVRINTMTANDIEGLDFGSEKEAYDFYVKYAKCTGFVVRKDFVNKNVRGTIVARQFVCNKQGVRSKKHLERVDRKRDHRPVTRINCDAHLRIHYNVERLIWEVTAFEPRHNHELTPSKFIHLFPAYRGMTDADKAQIDSLHSNALRSSVRTQNSEMDKHIGDPDAVNSKGAPKKNFRLKRTKHRSKCTDTKHDVRTCPIRIDVNGSLIDNDKDAAKFSKATCKSDTEMSRSDVNNIHGSVRSTKSGREIDKNAKEKSNYNTKQKKVKEMNGTNHHIGGEPMMSQVQPNAHQMHYPTPHFANSSQVPPHIYAVNGQTPPIGGLHTMSQLQPNAHQMLYATPNFANSSQVPAPTFVIDGQTPPILQQPPQYFFGMPATSYGSSCLNLLQQVTNKGGQSSGKNVRP 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g05192 474 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 9 219 - -
Trre14g05192 474 MobiDBLite consensus disorder prediction 219 243 - -
Trre14g05192 474 MobiDBLite consensus disorder prediction 43 59 - -
Trre14g05192 474 MobiDBLite consensus disorder prediction 1 60 - -
Trre14g05192 474 MobiDBLite consensus disorder prediction 26 42 - -
Trre14g05192 474 Pfam FAR1 DNA-binding domain 96 186 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g05192 Trre-Chr14 57801048 57805747 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Trre14g05192 FAR1 2.9e-21 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g05192 - - ccaj:109792835 251.906