Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g05129 ATGGAAAAAAGGTTTTCTTCTTCTTTGTTGTTATTGCTATTATTGATTACTTCTCTTGTGATATCTGTTTATGGTGAATATGCACATTGCAACTGTGATGACGATGATGGGATTTGGGGTATACAGAGTATTTTGGTTTGTCAAAAAGTCAGTGATTTTTTCATTGCTATTGCATATTTTTCTATACCCCTTGAGCTTATTTATTTTGTTAGTTACTCCAATGTTCCATTTAAATTGGTATTCCTTCAATTTGTTGCCTTCATTGTTCTATGTGGTTTGACCCATTTACTCAATGCCTATACTTACTATGGCCCTCATTCCTTTCATTTGTTTCTATTTCTCACTGTTGCTAAATTTTTCACTGCCCTTGTTTCATGCGCCACTGCAATTACTTTTCCCACCTTGATTCCTCTTCTTTTGAAAATCAAGGTGAGGGAGTTGTTTTTGAGGCAGAATGTGTTGGAATTGGGGCAAGAGGTTGGGATTATGAAGAAACAGAAGGAGGCTAGTTGGCATGTTAGGATGTTGACGCGTGAGATTAGGAAGTCGTTAGATAAGCATACCATTTTGTATACTACCCTTGTTGAGCTTTCCAAGGCGTTGGAGTTGCATAATTGTGCGGTTTGGATGCCTGATGAGGAAAGAAGGGTGATGCATTTGACTCATGAGTTGAAACCAAATCCGGCAAAGAGTTTTCACAGTTCTATTTCTGTAAGTGATTTGGATGTGTTAGAGATAAGAAAGAGCAAGGGGGTATCGATTTTGAGGCCTGATTCTGCACTTGGGGCTGCAAGTAGTGGTGGATCTGAGGACTCGGGTGCTGTAGCAGCCATTCGTATGCCGATACTTCATGTTTCAAATTTTAAGGGAGGGACACCGGAGTTTGTTGAGACATCTTATGCTATACTTGTTTTGGTTCTTCCAAAATCAAACTCAAGGGCTTGGACCTACCATGAGATGGAGATAGTGGAAGTAGTTGCTGACCAGGTTGCTGTGGCCTTGTCTCATGCATCTGTTCTTGAAGAGTCTCAGCTAATGAGACAGAAACTCGCTGAGCAAAACCGAGCGTTGCAACAGGCACAAAAGTATGCAATGATGGCCAGCCAGGCAAGGAGCTCATTTGAGAAGGTGATGAGCCATGGAATGAGGAGACCTATGCATTCAATCCTGGGCTTGCTTTCAATGTTTCAAGAGGATAATGTAAGACCTGAACAGAAGATTGTTGTTGACACAATGTTGAAAGTTAGCAATTCACTCTCGCGTTTGATAAATGATGTTATGGAGATTTCGGCCAACGATAAAGGAACTTTCCAGTTAGAGTCGAAACATTTCCATCTACATTCCATGATGAGGGAAGCTTCTTGTATTGCCAAGTGTTTGTGTGTATATAAAGGCTTTGGTCTTGAAATTGATGTGCAGAGATCTTTGCCTGATATGGTAATAGGTGATGAGGCAAGTGATTCTGGTAAGGATGATAGAAGTTCTGGAATATGGAGATCAAGCATGCAAAATAATGATGTATATATAAAATTTAATTTCCAGATAGCTGGTACTAGTTCCCATTCAGATGAATTGATTTTGACTAGAAGTAGTGCTAGTAGGATGCACCACAACAATGAACCTAAGGAGGGCTTGAGCTTCAGCATTTGCAAAACGCTTGTGCAGATGATGCAAGGTAATATCTGGATATCACCAAACTCTCTGGGTTTGGCACAAGGAATGACACTTCTTCTCAAGTTTCAATCCGGATCATCGCGTGGAAGATTTGTTCTAGCTCATAAAGAATTTTCAAACCAACAGTTTAGAGGGCTTAATGTTATTTTAGCCGATGATGATAATGTAAACATGACTGTAACAAAGAAGCTGCTTGAGAAGCTAGGTTGTCAAGTAACCGCTGTTTCATCGGGTTTTGATTGTTTGACTGCTATAACTGCCTCCAGTGTATCATTTAAAGTCATCCTTGTGGATCTTCACATGCCTGAAATGGATGGTTTTGAAGTTGCAAGGAAGATTCGGAAGTTCCAAAGCCGAAATTGGCCCTTGATTATTGCTCTTACAGCAAGTGCAGAAGAACACATAAAGGAAAGATGCCTTCAGGTCGGAATGAATGGATTGATTCGAAAACCTATCCTCCTTCACGAGTTAGCTGATGAACTTAGAACAGTCCTGCTACGTGCGGGTGAAAAATTCTAA 2193 0.4036 MEKRFSSSLLLLLLLITSLVISVYGEYAHCNCDDDDGIWGIQSILVCQKVSDFFIAIAYFSIPLELIYFVSYSNVPFKLVFLQFVAFIVLCGLTHLLNAYTYYGPHSFHLFLFLTVAKFFTALVSCATAITFPTLIPLLLKIKVRELFLRQNVLELGQEVGIMKKQKEASWHVRMLTREIRKSLDKHTILYTTLVELSKALELHNCAVWMPDEERRVMHLTHELKPNPAKSFHSSISVSDLDVLEIRKSKGVSILRPDSALGAASSGGSEDSGAVAAIRMPILHVSNFKGGTPEFVETSYAILVLVLPKSNSRAWTYHEMEIVEVVADQVAVALSHASVLEESQLMRQKLAEQNRALQQAQKYAMMASQARSSFEKVMSHGMRRPMHSILGLLSMFQEDNVRPEQKIVVDTMLKVSNSLSRLINDVMEISANDKGTFQLESKHFHLHSMMREASCIAKCLCVYKGFGLEIDVQRSLPDMVIGDEASDSGKDDRSSGIWRSSMQNNDVYIKFNFQIAGTSSHSDELILTRSSASRMHHNNEPKEGLSFSICKTLVQMMQGNIWISPNSLGLAQGMTLLLKFQSGSSRGRFVLAHKEFSNQQFRGLNVILADDDNVNMTVTKKLLEKLGCQVTAVSSGFDCLTAITASSVSFKVILVDLHMPEMDGFEVARKIRKFQSRNWPLIIALTASAEEHIKERCLQVGMNGLIRKPILLHELADELRTVLLRAGEKF 730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g05129 730 FunFam Ethylene receptor 4 337 431 - -
Trre14g05129 730 FunFam Ethylene receptor 602 726 - -
Trre14g05129 730 CDD HisKA 368 430 IPR003661 GO:0000155|GO:0007165
Trre14g05129 730 PANTHER TWO-COMPONENT SENSOR HISTIDINE KINASE 26 484 - -
Trre14g05129 730 PIRSF Ethylen_sen_hybr_HK 1 486 IPR014525 GO:0004672|GO:0005789|GO:0009723|GO:0038199|GO:0051740
Trre14g05129 730 PIRSF Ethylen_sen_hybr_HK 484 729 IPR014525 GO:0004672|GO:0005789|GO:0009723|GO:0038199|GO:0051740
Trre14g05129 730 Pfam GAF domain 187 334 IPR003018 GO:0005515
Trre14g05129 730 Gene3D - 335 433 - -
Trre14g05129 730 CDD REC_ETR-like 604 719 - -
Trre14g05129 730 Gene3D - 604 729 - -
Trre14g05129 730 SMART REC_2 604 719 IPR001789 GO:0000160
Trre14g05129 730 Pfam Response regulator receiver domain 606 719 IPR001789 GO:0000160
Trre14g05129 730 Pfam His Kinase A (phospho-acceptor) domain 371 434 IPR003661 GO:0000155|GO:0007165
Trre14g05129 730 SUPERFAMILY CheY-like 600 723 IPR011006 -
Trre14g05129 730 SMART gaf_1 185 344 IPR003018 GO:0005515
Trre14g05129 730 SUPERFAMILY GAF domain-like 188 337 - -
Trre14g05129 730 Gene3D - 169 334 IPR029016 -
Trre14g05129 730 SMART HisKA_10 370 435 IPR003661 GO:0000155|GO:0007165
Trre14g05129 730 ProSiteProfiles Response regulatory domain profile. 605 723 IPR001789 GO:0000160
Trre14g05129 730 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 355 435 IPR036097 GO:0000155|GO:0007165
Trre14g05129 730 Coils Coil 340 360 - -
Trre14g05129 730 CDD HATPase_ETR2_ERS2-EIN4-like 484 578 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g05129 Trre-Chr14 57354212 57356781 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g05129 21 728 Miscellaneous Gene Families AT3G04580 59.521 0.0 872
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Trre14g05129 GAF 2e-11 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g05129 K14509 - gmx:100805023 1148.27