Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g05125 ATGGAAAACAAAATCTATGAAGAAACCCTTAAGAAGAAACATTACCAAGTCCAGAAACATATTGGAGAAGGAGAATTTGGAACAATTTTCCAATGCTATCACGCCATTACAAACTGTTCCTATGCCATTAAAATAACAAAACGTAAATTTGTCAATAACGAAACCAAAATCATGAACTACCTCCCTCCACATCCAAACATCCTTAAAATCTTTGACTCATTTGAAGATATAGATTTCTCATACATGGTACTTGAACTCTGCCAAACCAACGACCTTCTCGAAGTCATAAGTAAAGGTATATTATCGGAGCCACAAGCTGCATGTATCGTTAAGAAGCTTCTAGAAGCGATAGAGCATTGTCATAAAAACGGAGTGGCACATAGAGACATTAAACCAGAGAATGTTTTGTTTGATTTTGATGGAAATGTCAAACTCGCCGATTTTGGTTGTTCAGAATGTTTTTTTAAGGATGGAAGAAAGAAAAATATGACTGAAGATGTGGGAACACCTTTTTACGTGCCACCTGAAGTGATCTTGAGAAAACATTGTTATAATGAGAAAGTTGATATTTGGAGTTGTGGTGTTACTCTTTATGTTATGTTGAGTGGGATAATACCCTTTGTTGGAGAAACTAATGATAAGATTTTTGAGAGTATCTTGAAGACAGATTATTTGAGGTTTCCAAAAGAAAAATTCGAATCTGTGTCGTCGTCTGTTAAAGGTCTTATTAGGAGGATGGTTTGTTGGGATCCCTCGAGACGAATATCAGCTAAGCAAGCCTTGATGCATCCGTGGATCGTGAAAGGAGGTGTGATTAAAGATGATGATGATGATGTTATTGATGTGTTTGGTTCGACATTGACAAAGTGCATCCGTCCGCCCAACAAGCTTTCTATCTCGAGAGCAAGAAGCTACAAAGGGTAG 924 0.3723 MENKIYEETLKKKHYQVQKHIGEGEFGTIFQCYHAITNCSYAIKITKRKFVNNETKIMNYLPPHPNILKIFDSFEDIDFSYMVLELCQTNDLLEVISKGILSEPQAACIVKKLLEAIEHCHKNGVAHRDIKPENVLFDFDGNVKLADFGCSECFFKDGRKKNMTEDVGTPFYVPPEVILRKHCYNEKVDIWSCGVTLYVMLSGIIPFVGETNDKIFESILKTDYLRFPKEKFESVSSSVKGLIRRMVCWDPSRRISAKQALMHPWIVKGGVIKDDDDDVIDVFGSTLTKCIRPPNKLSISRARSYKG 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g05125 307 FunFam Maternal embryonic leucine zipper kinase 3 276 - -
Trre14g05125 307 Pfam Protein kinase domain 15 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g05125 307 Gene3D Transferase(Phosphotransferase) domain 1 6 292 - -
Trre14g05125 307 PANTHER SERINE/THREONINE-PROTEIN KINASE 6 273 - -
Trre14g05125 307 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
Trre14g05125 307 SUPERFAMILY Protein kinase-like (PK-like) 9 268 IPR011009 -
Trre14g05125 307 CDD STKc_CAMK 14 265 - -
Trre14g05125 307 ProSitePatterns Serine/Threonine protein kinases active-site signature. 125 137 IPR008271 GO:0004672|GO:0006468
Trre14g05125 307 SMART serkin_6 15 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g05125 307 ProSiteProfiles Protein kinase domain profile. 15 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g05125 Trre-Chr14 57333891 57335408 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g05125 6 267 EF-hand Containing Proteins AT4G09570 41.455 9.64e-65 210
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Trre14g05125 Pkinase 9.8e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g05125 - K08794 mtr:11423185 312.383