Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g05121 ATGATTACTACTTCTGTAAATCCACTCTCATTCAATTATCAACAAGGCTTTAAATATGATGATGTGCAACTAAAAGGAGATGCTTCTTTGTTGTATTCATACATCCAACTCACTTCAATCTCAAGGTACCAAAGTAATGCTTACAGTGTCGGGCGAGTCACGTGTTTCGAGCCATTACAACTATGGGACAAGGCCACAAGAAAACTCACTGATTTCACTACTCAATTTTCCTTTGTAATTTACTCAAATGAAACTGATTTTGGAGATGGATTGTCATTTTTCATAGCAGATCCAAAACTTCCACTTTATTACCATATAAAACAAGGAGGTGGTCTTGGTCTTGTGGATGAATACCAAATAGTTCATTCTAAATATTCATTTCTAGCAGTGGAATTTGACACTCACCAAAATTCTTGGGATCCATCAGGCACTCATGTAGGTATAAATTTCAACTCTATGATATCAAATATAACTAAACCATGGTTCATAGATATTAGGAGTAAGAAGATTTATGATTGTAAAATTGAGTACAATTCAACTACTCATAATTTGAATGTTTCTTTCACTGGAAACATAACAAAAACTGCTACAGGATATATGTTTGAGATGAATACATTAAAGTCATGGTCATTCAATTCAAGTTTAAAAATTCATGATGAGATTAATCCTAGTCAAATCCCAAAAAATCCCAGTCCTTCGCCGATTCCCAATAGTCCTAAAATAGATAGCAAAAAAGGTAGTATGTGGGTTGGGCTAGGAGTTGGTGTAGCTCTTGCATCAAGTTTACTTATTTTAGGAGAGATTTGTATTGTAATTTGGAAAAGGACTAAAGGGAAAAAAGAAGATTCAATTTTTGACATGAAAATGGATGCTGAATTCCAAATTGGCACTGGACCTAAAAAGTTTTGCTATAATAAATTGGCGAGTGCAACAAATAACTTTGCAGAAGAACAAAAGATTGGACAAGGTGGTTTTGGCGGTGTTTATAAAGGCTATTTGAAAGATATAGATACCAATGTTGCTATAAAACGGATATCGAGAGAGTCTAGACAAGGGATTAAGGAATATGCAACTGAAGTGAAGATCATTAGCCAACTTAGGCATAGGAATTTAGTACAACTAATTGGTTGGTGTCACAAGAAAAAAGACTTTCTCCTTATATATGAATTCTTGCAAAATGGTAGCTTACTTATATCGCGGAAAAAGCGTATTGACATGGCAAATGAGCTTGGTGATTTCGGATTGGCTAGGCTCGTGGATTATGAGAAAGGATCACAATCACAAACGACGGTTATAGCTGGGACCATGGGGTACATAGCTCCTGAATATGTCACAATAGGGAAGGTTACAAAGGAATCAGATATATACAGTTTTGGTATTGTTTCATTGGAATTAGCCAGTGGAAGAAAACCAATTGATCTTAATGCCAAGGAGGATCAAATGGCTATATTTGATTGGGTTTGGGAGCTTTATAGATTAGGAAGGTTGCTCGAAGTAGTTGACACGAAACTTGGGGGTGTATTTGATGAGGAACAAATGGAACGTGTCGTGGTTATTGGTCTTTGGTGTGCAAATCCAAATTATTCATTTAGGCCATCCGAAAGACAAGTTATTCAGGTGCTTAAACTCGAAGCTCCTTTACCAATTCTCCCACCTCCAACAAAGAGTCCAATTATCGGTCCAGTTTCTTCTGCCTCTCCGCAACTTACACTTCATAACCAGCTAGAATAA 1731 0.3634 MITTSVNPLSFNYQQGFKYDDVQLKGDASLLYSYIQLTSISRYQSNAYSVGRVTCFEPLQLWDKATRKLTDFTTQFSFVIYSNETDFGDGLSFFIADPKLPLYYHIKQGGGLGLVDEYQIVHSKYSFLAVEFDTHQNSWDPSGTHVGINFNSMISNITKPWFIDIRSKKIYDCKIEYNSTTHNLNVSFTGNITKTATGYMFEMNTLKSWSFNSSLKIHDEINPSQIPKNPSPSPIPNSPKIDSKKGSMWVGLGVGVALASSLLILGEICIVIWKRTKGKKEDSIFDMKMDAEFQIGTGPKKFCYNKLASATNNFAEEQKIGQGGFGGVYKGYLKDIDTNVAIKRISRESRQGIKEYATEVKIISQLRHRNLVQLIGWCHKKKDFLLIYEFLQNGSLLISRKKRIDMANELGDFGLARLVDYEKGSQSQTTVIAGTMGYIAPEYVTIGKVTKESDIYSFGIVSLELASGRKPIDLNAKEDQMAIFDWVWELYRLGRLLEVVDTKLGGVFDEEQMERVVVIGLWCANPNYSFRPSERQVIQVLKLEAPLPILPPPTKSPIIGPVSSASPQLTLHNQLE 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g05121 576 Gene3D Phosphorylase Kinase; domain 1 299 390 - -
Trre14g05121 576 PANTHER - 45 396 - -
Trre14g05121 576 CDD lectin_legume_LecRK_Arcelin_ConA 9 215 IPR001220 GO:0030246
Trre14g05121 576 SUPERFAMILY Protein kinase-like (PK-like) 298 561 IPR011009 -
Trre14g05121 576 FunFam L-type lectin-domain containing receptor kinase IX.1 299 390 - -
Trre14g05121 576 ProSiteProfiles Protein kinase domain profile. 314 550 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g05121 576 FunFam Lectin-domain containing receptor kinase A4.3 370 560 - -
Trre14g05121 576 Pfam Protein kinase domain 408 486 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g05121 576 Pfam Protein kinase domain 315 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g05121 576 Pfam Legume lectin domain 9 189 IPR001220 GO:0030246
Trre14g05121 576 ProSitePatterns Legume lectins beta-chain signature. 128 134 IPR019825 -
Trre14g05121 576 ProSitePatterns Protein kinases ATP-binding region signature. 320 343 IPR017441 GO:0005524
Trre14g05121 576 Gene3D Transferase(Phosphotransferase) domain 1 397 546 - -
Trre14g05121 576 SUPERFAMILY Concanavalin A-like lectins/glucanases 9 230 IPR013320 -
Trre14g05121 576 Gene3D - 7 227 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g05121 Trre-Chr14 57311338 57313258 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g05121 6 558 Receptor kinase-like Gene Family AT5G10530 37.697 3.47e-117 360
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Trre14g05121 Lectin_legB 1e-42 CL0004
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g05121 - - gmx:100814713 708.368