Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g05120 ATGACTACTTGCTATGTTAGTCTCCATGCAGTGAGAATAATTTTCTTGCTCCAAATGATTACTACTTTTGTAAAGCCACTCTCATTTGATTACCAAGGGTTTAAATATGATGATGTGAAGCCAGAAGGAGATGCTTCTTTGTTGTATTCATACATCCAACTTACTTCAACCTCAAGGTATCAAACCAATACTTACAGTGTCGGTCGAGTCACGTGTTTCGAGCCATTACAACTATGGGACAAGACCTCAAGAAAACTCACTGATTTCACTACTAAATTTTCCTTTGTAGTTTACTCAAACAAGACTAATTTTGGAGATGGATTAGCATTTTTCTTTGCAGATCCAGAACTTCCACTTCCTGATCATATGCAAGATGGTGGTGGTCTTGGTCTTGTGGATAAATATCAAATAATGAATTCTACTAAATATTCATTTTTAGCAGTGGAGTTTGATACTTGCCACAATCCTTGGGATCCATCAGGTATGCATGTAGGTATAAATTTCAACTCTATGATGTCTATAAAAACTAAACCATGGTTGATTGATATTAGCGATAAGACGGCTTATTATGATTGTAAAATTGTGTACAATTCAAGTGATCATAATTTAAAAATTTCTTACACTGGTAAAATAATCAATGCTGCTACAGGACTTATGTTTGAGATGAATACATTAATGTCATGGTCATTCAATTCAAGTTTACAAATTCATAATGTGAAAGTATCCTCCCCAATATCAACAAATCCTAGTCCTTCACCAATTCCAAATAGTCCTAAAATCGATAGCAAAAAAGGTACTATATGGGTAGGACTAGGAGTTGGTGTAGTGACTGCAACAAATAACTTTGAAGAAACACAAAAGATAGGACAAGGTGGTTTTGGCGGTGTTTATAAAGGCTATTTGAAAGACATAGATTCCAATGTTGCTATAAAAAGGATGTCAAGAGAGTCTAAACAAGGGATTAAGGAATATGCAACTGAAGTGAAGATCATTAGCCAACTTCGGCATAGGAATTTAGTACAACTAATTGGTTGGTGTCACATGAAAAAAGACTTTCTTCTTATATATGAGTTCATGCAAAATGGTAGCTTAGATTCTCATCTATACCGCGGCAAAAGCGTATTGACTTGGCATATGCGGTACAACATTGCTATGGACTTGGCTTCTGCATTGTTGTACCTTCATGAAGAATGGGAACAATGTGTGATTCATAGAGACATAAAATCCAGCAACATTATGTTAGACTATAATTTCAATGCTAAACTTGGTGATTTCGGGATGGCTAGGTTGGTGGATCATGAGAAAGAATCACAAAGTACAACAATAATAGCGGGGACTATGGGAAAACCAATTGATCTTAATGCTAAAGAGGATCAAGTGACTATATTCGATTGGGTTCGAGAGCTTTATAGATTAGGTAGGTTCCTTGAAGTAGTAGACACAAAACTTGAGGGTGTATTCGATAACGATCAAATGGAACGTTTAGTGGTTATTGGTCTTTGGTGTGCAAATCCAAATTATTCATTTAGGCCATCTGCAAGACAAGTGATTCAAGATTATTTTGATGTACATAAAGTTAATGGATAG 1587 0.3554 MTTCYVSLHAVRIIFLLQMITTFVKPLSFDYQGFKYDDVKPEGDASLLYSYIQLTSTSRYQTNTYSVGRVTCFEPLQLWDKTSRKLTDFTTKFSFVVYSNKTNFGDGLAFFFADPELPLPDHMQDGGGLGLVDKYQIMNSTKYSFLAVEFDTCHNPWDPSGMHVGINFNSMMSIKTKPWLIDISDKTAYYDCKIVYNSSDHNLKISYTGKIINAATGLMFEMNTLMSWSFNSSLQIHNVKVSSPISTNPSPSPIPNSPKIDSKKGTIWVGLGVGVVTATNNFEETQKIGQGGFGGVYKGYLKDIDSNVAIKRMSRESKQGIKEYATEVKIISQLRHRNLVQLIGWCHMKKDFLLIYEFMQNGSLDSHLYRGKSVLTWHMRYNIAMDLASALLYLHEEWEQCVIHRDIKSSNIMLDYNFNAKLGDFGMARLVDHEKESQSTTIIAGTMGKPIDLNAKEDQVTIFDWVRELYRLGRFLEVVDTKLEGVFDNDQMERLVVIGLWCANPNYSFRPSARQVIQDYFDVHKVNG 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g05120 528 Pfam Legume lectin domain 27 208 IPR001220 GO:0030246
Trre14g05120 528 ProSitePatterns Serine/Threonine protein kinases active-site signature. 402 414 IPR008271 GO:0004672|GO:0006468
Trre14g05120 528 Gene3D Transferase(Phosphotransferase) domain 1 448 526 - -
Trre14g05120 528 FunFam Lectin-domain containing receptor kinase A4.3 359 449 - -
Trre14g05120 528 ProSitePatterns Protein kinases ATP-binding region signature. 288 311 IPR017441 GO:0005524
Trre14g05120 528 Gene3D - 25 246 - -
Trre14g05120 528 Pfam Protein kinase domain 282 439 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g05120 528 PANTHER - 55 518 - -
Trre14g05120 528 SUPERFAMILY Protein kinase-like (PK-like) 275 522 IPR011009 -
Trre14g05120 528 SMART serkin_6 282 521 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g05120 528 Gene3D Phosphorylase Kinase; domain 1 274 358 - -
Trre14g05120 528 ProSitePatterns Legume lectins beta-chain signature. 146 152 IPR019825 -
Trre14g05120 528 ProSiteProfiles Protein kinase domain profile. 282 528 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g05120 528 FunFam L-type lectin-domain containing receptor kinase IX.1 273 358 - -
Trre14g05120 528 Gene3D Transferase(Phosphotransferase) domain 1 359 447 - -
Trre14g05120 528 SUPERFAMILY Concanavalin A-like lectins/glucanases 26 242 IPR013320 -
Trre14g05120 528 CDD lectin_legume_LecRK_Arcelin_ConA 27 234 IPR001220 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g05120 Trre-Chr14 57308328 57310385 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g05120 13 518 Receptor kinase-like Gene Family AT5G10530 37.438 4.76e-110 340
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Trre14g05120 Lectin_legB 3.4e-40 CL0004
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g05120 - - aprc:113852043 618.231