Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g05082 ATGGATTGGGTTTTTGTTCATAAAACATGGGACAAGTGGGCTTCTTCCAATATTGGTTCTGGTCTTCCTTTAAAAGCTGCTTTATTGATTAATTACGATCCCACTGGACCCTCTCGTTTGTTATCTACTGTTGCTGAACAAGAAGGAATGAAAGTCAATATCATTGAATTGAGACATTTTGTGGATTTTGTCAGAAACAATCAACTCCAAACTGAGAGCTTCTATATTGGCTCCAATCAGTACTTGGTGACATCAATTCATGAGAACTGGTTTAGTGCAAGGTGCATAAACACATCAAAGCCTGCTGGGGAAGGTGCAATAGTTTTGCAAACAGCGGCGTATATCTTGGTTGCTCTGTATGAAGGTTCCATTGGTCCGGCATCTCGTGCTATGTCAGCTGCCGATCAGTTAACTGGGCACCACAGAAGACCACTCCTGAGAAGAAGGTCAGAGACGAGTTCATCAATTCAATTCAACCTTCTTCCATCGATTCACACTCCAAATTCCAAATCAAAATTTACAATGAAATCAAACACTACAACTAGTTACTGCTATTTATTCTTCATAATCTCTCTACTTTGCATTCAATTTCAAGCTTCTTTGGGATCTAAGAAAACTGATGAAGCATACGTAACTCTTTTATACGGAGATGAATTCTTATTGGGCGTTCGAGTTCTTGGAAAATCAATACGCAACACTCGATCCAATAAAGATATGGTTGTATTAGTCTCAGATGGAGTTTCTGATTTCGCCAAAAAACTTCTCCTTGCTGATGGTTGGATAGTTGAGCAGATTAGTTTACTTGCTAATCCTAATCGTGTTCGTCCGACGCGATTTTGGGGTGTTTACACAAAGTTGAGAATTTTTAACATGACCAATTACAAAAAAGTTGTTTACCTCGATGCGGATACTATTGTGGTTAAAAATATTGATGATCTTTTCAAATGTCGGAAATTTTGTGCTAATTTGAAGCATTCTGAGAGGTTGAATTCGGGAGTTATGGTGGTGGAGCCGTCTGAAACTATTTTCAATGACATGGTGAACAAAATCAAAACTACCGCATCTTACACTGGAGGAGATCAAGGATTTCTTAATTCCTATTTCTCTGGGTTTCCCAATGCACATCTTTTTGACCCAAACTTGTCCCCGGAGGCGTTGAAATCCAGACCCACTCCTGAAATGGAGAGACTGTCAACACTGTATAATGCAGATGTTGGTCTTTACATGCTCGCTAACAAGTGGATGGTAGATGAGAAAGAGCTCCGTGTGATTCACTATACACTGGGACCCCTTAAGCCTTGGGATTGGTGGACATCTTGGCTTTTGAAACCTGTTGATGTCTGGCAGGATGCAAGGGAAAAGCTTGGGGAATCTCTTCCTGGAACAGGAGGTGGCCAAAATCCTAATGACTATTTTCTTGTGAAATTTCTCTTTCTGCTACCATTCTGTGCTTTACTATTCTGCTGCTATAATTCATTTATGAAGAATCGAGAATACTTCAGTTCATTTTGTAGAGGCTCGCCATGTAATCAATTCAGACAACTTTATTATAAGATTAGATCAAGTGGACCACTTCCATATACAACTATTTCGACATCAGCCAATTCAACCCATCAGCTCTCAAATGGTTCTCAGTGCAAGGTTCCTACCTATTTGGGCGGTATTTCTGTTTGTGTCTGTTTAACGGCTGCAGTGGTGTCTCTTGGACTAGCTCTCTTGATTGTTCCCCGGCAAGTGATGCCATGGACTGGTTTGCTTTTGATGTATGAATGGACATTCACAGTGTTTATTATATTATTTGGAGGTTATCTTCATTTGATTTATCGGTGGGGAAAATATGTGGCATCACGAGCGGCATCCTCGTCACTTCCCGAATCTTTGGATTATGATTCTGGAAAACGTCATCAGAGACAGACGTCATCGTGTGATGTTGCTACGTGGTACTATGGTTTAGGGATGGCCTTGTTGGCCATTGGTGCTCCATCTTTGCCTTGTCTTTTTGGAATAACTGCCTTGTTTTTAAGGTTAGGTTTGATGGTTGTTGGGGGCATCATATTGGCATCTTTCATGACATATGCTTCCAAACACCTTGCTATCCGATCATTTCTAAAAGGCCTTGAAGAGACGGATAATACTCCAAATAGGAGCTTATGTTTCTTATGTTGA 2166 0.4044 MDWVFVHKTWDKWASSNIGSGLPLKAALLINYDPTGPSRLLSTVAEQEGMKVNIIELRHFVDFVRNNQLQTESFYIGSNQYLVTSIHENWFSARCINTSKPAGEGAIVLQTAAYILVALYEGSIGPASRAMSAADQLTGHHRRPLLRRRSETSSSIQFNLLPSIHTPNSKSKFTMKSNTTTSYCYLFFIISLLCIQFQASLGSKKTDEAYVTLLYGDEFLLGVRVLGKSIRNTRSNKDMVVLVSDGVSDFAKKLLLADGWIVEQISLLANPNRVRPTRFWGVYTKLRIFNMTNYKKVVYLDADTIVVKNIDDLFKCRKFCANLKHSERLNSGVMVVEPSETIFNDMVNKIKTTASYTGGDQGFLNSYFSGFPNAHLFDPNLSPEALKSRPTPEMERLSTLYNADVGLYMLANKWMVDEKELRVIHYTLGPLKPWDWWTSWLLKPVDVWQDAREKLGESLPGTGGGQNPNDYFLVKFLFLLPFCALLFCCYNSFMKNREYFSSFCRGSPCNQFRQLYYKIRSSGPLPYTTISTSANSTHQLSNGSQCKVPTYLGGISVCVCLTAAVVSLGLALLIVPRQVMPWTGLLLMYEWTFTVFIILFGGYLHLIYRWGKYVASRAASSSLPESLDYDSGKRHQRQTSSCDVATWYYGLGMALLAIGAPSLPCLFGITALFLRLGLMVVGGIILASFMTYASKHLAIRSFLKGLEETDNTPNRSLCFLC 721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g05082 721 Pfam Glycosyl transferase family 8 278 315 IPR002495 GO:0016757
Trre14g05082 721 Pfam Profilin 9 137 IPR005455 GO:0003779
Trre14g05082 721 SUPERFAMILY Nucleotide-diphospho-sugar transferases 208 449 IPR029044 -
Trre14g05082 721 SUPERFAMILY Profilin (actin-binding protein) 10 128 IPR036140 -
Trre14g05082 721 PANTHER GLYCOGENIN SUBFAMILY MEMBER 191 452 - -
Trre14g05082 721 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 205 454 IPR029044 -
Trre14g05082 721 Gene3D Dynein light chain 2a, cytoplasmic 9 140 - -
Trre14g05082 721 CDD GT8_Glycogenin 208 455 - -
Trre14g05082 721 FunFam Hexosyltransferase 205 454 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g05082 Trre-Chr14 57096784 57108107 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g05082 1 143 Carbohydrate Esterase AT4G19410 64.828 1.02e-57 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g05082 K22809 - gmx:100810905 910.983