Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g05053 ATGGAAAGAGTATTTTCAGTTGCTGAAATATCAGAGCAATATTGGTTAACATCAAAAGAGTGCAAAGAAAGAGGATCAAAGATGAATCGTAGTGAATCAGAATGGGCTTTTCAACAGTTTTTACAAGAAGCTGCTATAGAAACAAATACATCAAATGCAAAACCTTGTAGTTCATCTTCAACTTCAACTTCTTCTTCAAACGTTGATGTTAAACTCAACATAAATAATAATAATAATATTGATTCTGAGGAGTATCATTCTATTCTGAAGACCAAGCTTGATCTTGCCTGCGCCGCCGTTGCTATGTCTCGGGGATCTTTGGTCAATTCTAAGGGTCCTGACAATGGATCACAGGCATCTCATCCACCTCTGCCTGCTTTAAAAGAATCTGGCCTTTCTGGAAATGATACATCTAAATTAAAAAATAAAGATGTGAAAGTAGCTGCTGGAGTTCCTTCCATGCAAAGGAAACCTGCTGTTACAATCAAGTCAATGACAAGTGGTTCATCAGATGATGAAGAAGCCGAGGGAGAGATTAATATGAACGGAAACATGAATCCTTCTGATGCGAAAAGAGTTAGGAGGATGCTCTCTAATAGGGAGTCTGCTAGACGCTCAAGAAGACGAAAGCAAGCACATTTAACCGAGCTTGAAACACAGGTCTCTCAATTAAGAGGTGAAAATTCTTCATTGTTAAAGCGTTTAACAGACGTGACCCAAAAATACACCGATTCTGCTACTGACAACAGAGTATTAAAAGCTCAAGTTGAAACATTAAGAGCAAAGGTGGAGTTGGCTGAAGGGAGGGTTACAAAATCTCCTGGGTTTAATCCAATGTTTAATGCAATGTCTGAGATGTCATCAGTAATGGGAATGGAAATGTCATTATTTGATGGAAGCCCGTCTGAGTCATCAGCCGATGCATCCGTAACTGTGCAAGAACATCGAAATAATCACTTTTTTCAACCAACTTCTAATAATCTTATGTCTGGTCATGATATGAGAGGAGTCAAAGTCAATAATGGGTTGGGAGGCAATGTTTCTTCAGCTGAAAGTGTGCTGAAGAACACTGCAGCTGGTGGGAACAAGATAAGAAGGGCGAATTCCCTGCCACGGGTAGCTAGCTTGGAATATCTTCAGACTCGGATTCGCAGTGGTGCTGACGAAGACAAGTAA 1176 0.3997 MERVFSVAEISEQYWLTSKECKERGSKMNRSESEWAFQQFLQEAAIETNTSNAKPCSSSSTSTSSSNVDVKLNINNNNNIDSEEYHSILKTKLDLACAAVAMSRGSLVNSKGPDNGSQASHPPLPALKESGLSGNDTSKLKNKDVKVAAGVPSMQRKPAVTIKSMTSGSSDDEEAEGEINMNGNMNPSDAKRVRRMLSNRESARRSRRRKQAHLTELETQVSQLRGENSSLLKRLTDVTQKYTDSATDNRVLKAQVETLRAKVELAEGRVTKSPGFNPMFNAMSEMSSVMGMEMSLFDGSPSESSADASVTVQEHRNNHFFQPTSNNLMSGHDMRGVKVNNGLGGNVSSAESVLKNTAAGGNKIRRANSLPRVASLEYLQTRIRSGADEDK 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g05053 391 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 194 209 IPR004827 GO:0003700|GO:0006355
Trre14g05053 391 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 189 241 IPR004827 GO:0003700|GO:0006355
Trre14g05053 391 Gene3D - 190 246 - -
Trre14g05053 391 SUPERFAMILY Leucine zipper domain 191 242 IPR046347 GO:0003700|GO:0006355
Trre14g05053 391 CDD bZIP_plant_GBF1 192 242 IPR045314 GO:0003700|GO:0006355
Trre14g05053 391 SMART brlzneu 187 251 IPR004827 GO:0003700|GO:0006355
Trre14g05053 391 Pfam bZIP transcription factor 190 242 IPR004827 GO:0003700|GO:0006355
Trre14g05053 391 MobiDBLite consensus disorder prediction 108 142 - -
Trre14g05053 391 MobiDBLite consensus disorder prediction 161 190 - -
Trre14g05053 391 FunFam BZIP transcription factor 189 240 - -
Trre14g05053 391 Coils Coil 249 269 - -
Trre14g05053 391 PANTHER BASIC LEUCINE ZIPPER 63 1 386 - -
Trre14g05053 391 Pfam Basic leucine-zipper C terminal 258 387 IPR020983 -
Trre14g05053 391 Coils Coil 200 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g05053 Trre-Chr14 56870386 56873530 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g05053 1 280 bZIP Transcription Factor Family AT4G02640 35.647 6.74e-36 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Trre14g05053 bZIP_C 7.3e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g05053 K25784 - gmx:778137 373.244