Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trre14g05039 | ATGGATCCATCACTTTGTGCCAATGGTTGCGGTTTCTATGGTTCTGCTTCAACCAAGAACCTTTGTTCAAAGTGTTACAAAGATTATCTCAAAGAAAACATCACCAAATCAAATGATGAAAACTCAAACTCAACATCTTCTTCTTGTCCTTCAAAGAACACTAATGTTGATGATGTTTGTGATGTTGTAGCAGCTGTTTCTCTCACTGACAATGATAACTTGAAGAAGAAGAAAAATAGGTGCAAGAGTTGCAACAAAAAAGTAGGACTAATAGGGTTCAATTGTCGTTGCGGCGAAGTGTTTTGTGGAATGCATAGATACCCAGAAGAACATACATGCAAAGTCAATTTAAAGGAGATTGGTCGTCAAATATTAGATAAACAAAATCCTTTATGTATGGGTGACAAGTTAGAACACCGAATCTAG | 426 | 0.3638 | MDPSLCANGCGFYGSASTKNLCSKCYKDYLKENITKSNDENSNSTSSSCPSKNTNVDDVCDVVAAVSLTDNDNLKKKKNRCKSCNKKVGLIGFNCRCGEVFCGMHRYPEEHTCKVNLKEIGRQILDKQNPLCMGDKLEHRI | 141 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trre14g05039 | 141 | SMART | AN1_Zf_4 | 81 | 118 | IPR000058 | GO:0008270 | |
Trre14g05039 | 141 | Pfam | A20-like zinc finger | 4 | 27 | IPR002653 | GO:0003677|GO:0008270 | |
Trre14g05039 | 141 | PANTHER | AN1-TYPE ZINC FINGER PROTEIN | 2 | 138 | - | - | |
Trre14g05039 | 141 | Gene3D | - | 60 | 135 | IPR035896 | - | |
Trre14g05039 | 141 | FunFam | Zinc finger AN1-type containing 6 | 51 | 136 | - | - | |
Trre14g05039 | 141 | SUPERFAMILY | Glucocorticoid receptor-like (DNA-binding domain) | 5 | 51 | - | - | |
Trre14g05039 | 141 | SUPERFAMILY | AN1-like Zinc finger | 70 | 135 | IPR035896 | - | |
Trre14g05039 | 141 | ProSiteProfiles | Zinc finger AN1-type profile. | 75 | 121 | IPR000058 | GO:0008270 | |
Trre14g05039 | 141 | Pfam | AN1-like Zinc finger | 81 | 114 | IPR000058 | GO:0008270 | |
Trre14g05039 | 141 | ProSiteProfiles | Zinc finger A20-type profile. | 1 | 34 | IPR002653 | GO:0003677|GO:0008270 | |
Trre14g05039 | 141 | SMART | A20_3 | 3 | 27 | IPR002653 | GO:0003677|GO:0008270 | |
Trre14g05039 | 141 | Gene3D | - | 1 | 53 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trre14g05039 | Trre-Chr14 | 56781490 | 56781915 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trre14g05039 | 5 | 138 | C2H2 Transcription Factor Family | AT3G52800 | 39.610 | 8.85e-28 | 99.4 |