Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g05039 ATGGATCCATCACTTTGTGCCAATGGTTGCGGTTTCTATGGTTCTGCTTCAACCAAGAACCTTTGTTCAAAGTGTTACAAAGATTATCTCAAAGAAAACATCACCAAATCAAATGATGAAAACTCAAACTCAACATCTTCTTCTTGTCCTTCAAAGAACACTAATGTTGATGATGTTTGTGATGTTGTAGCAGCTGTTTCTCTCACTGACAATGATAACTTGAAGAAGAAGAAAAATAGGTGCAAGAGTTGCAACAAAAAAGTAGGACTAATAGGGTTCAATTGTCGTTGCGGCGAAGTGTTTTGTGGAATGCATAGATACCCAGAAGAACATACATGCAAAGTCAATTTAAAGGAGATTGGTCGTCAAATATTAGATAAACAAAATCCTTTATGTATGGGTGACAAGTTAGAACACCGAATCTAG 426 0.3638 MDPSLCANGCGFYGSASTKNLCSKCYKDYLKENITKSNDENSNSTSSSCPSKNTNVDDVCDVVAAVSLTDNDNLKKKKNRCKSCNKKVGLIGFNCRCGEVFCGMHRYPEEHTCKVNLKEIGRQILDKQNPLCMGDKLEHRI 141
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Trre14g05039 141 SMART AN1_Zf_4 81 118 IPR000058 GO:0008270
Trre14g05039 141 Pfam A20-like zinc finger 4 27 IPR002653 GO:0003677|GO:0008270
Trre14g05039 141 PANTHER AN1-TYPE ZINC FINGER PROTEIN 2 138 - -
Trre14g05039 141 Gene3D - 60 135 IPR035896 -
Trre14g05039 141 FunFam Zinc finger AN1-type containing 6 51 136 - -
Trre14g05039 141 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 5 51 - -
Trre14g05039 141 SUPERFAMILY AN1-like Zinc finger 70 135 IPR035896 -
Trre14g05039 141 ProSiteProfiles Zinc finger AN1-type profile. 75 121 IPR000058 GO:0008270
Trre14g05039 141 Pfam AN1-like Zinc finger 81 114 IPR000058 GO:0008270
Trre14g05039 141 ProSiteProfiles Zinc finger A20-type profile. 1 34 IPR002653 GO:0003677|GO:0008270
Trre14g05039 141 SMART A20_3 3 27 IPR002653 GO:0003677|GO:0008270
Trre14g05039 141 Gene3D - 1 53 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Trre14g05039 Trre-Chr14 56781490 56781915 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g05039 5 138 C2H2 Transcription Factor Family AT3G52800 39.610 8.85e-28 99.4