Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g05037 ATGGGGAAGGCAAGTAAATGGATTAGAAACCTTCTTCTAGGGAAAAAAGAAGACAACTTAAAGCAGATTGATACATTCTGCTCCGAGAATAAGACTGCAAACACGGTTAGTAGTAGTCGTAATAGTAGTAGTAATAATAATAAGATAGTAGTGAAGCGCAAATGGAGTTTCCGAAAACTAACAAGTGGAAGATCAACAGGAAAAGTAGTAGCTCATAAAATTTCCAAGTCTTTTGATTCAGTTGACTCTCCAAAATTGCAAATACAAGCCTTAATGTTCCAAACTCAGACCCCAAGGACAGCTGCTGAATTTGTAAGAACAGCTGCTACAAGGATTCAAGCTTCCTTCCGCTCCTATTTGGCAAGGAGAGCATTGCATGCTTTAAGAGGATTAGTTAAGTTACAAGCACTAGTGAGGGGTCACCTTGTAAGGAAACAAACAACTGCAACACTGCGTGGGATGCATGCATTGATGTCGATACAGGTTAGAGCTCGAATTAAAAGGATTAAGATGGCAGAAGAAGTTATTCCCCCGGAAATATCACCTCCCCAACACACAGAAAGTCCCTGCTTCCAAGAGTACATGACACAACCAAAACAACATCAAAATATGAATGTGGAAGAAATGTTAGAGGCATTGAGGAGTAGAAGTGGGCCACTAGATGTAAAGAGCAGAAAATATGATTCAATGGCATATTATTCAAAGAGTGAATCAATTTCAAAACGAGAAAATCAATTGAAGAAGGAGAATCATAACAATAACAATAACAATACTACTGCTACTACAATCATCACAGCACCAAACAGCCCAGAAAAATACTACAGAGACATGATTGATTATTTAAATCCAAGATCATCAATTGCATTATCGGCGTCTCAGCGCCACATGGCGCCTCCTCGACAATCATGGTCATCACCAAAAAATTACATGAACAAGACAGAATCTTCAAAGGCAAAAACAAGGTCTAGTAGTGAACCAAGACAAAGACCAACCAAACAAGGAACAAAGCAAAAAAACAGCAACTCTATTGAATCTAGTACTAGTAGTACTTCATTGAAGAAAAATATGTTGTCAAATTCAGCAAGGTATGATCATTGGGTTGTTAATTCAATGAAGGATAGTAACCGTAACTCCTTTGGTAGCTACACAGTCACTAATAGTGATGATTCCTACTACTCATGA 1182 0.3816 MGKASKWIRNLLLGKKEDNLKQIDTFCSENKTANTVSSSRNSSSNNNKIVVKRKWSFRKLTSGRSTGKVVAHKISKSFDSVDSPKLQIQALMFQTQTPRTAAEFVRTAATRIQASFRSYLARRALHALRGLVKLQALVRGHLVRKQTTATLRGMHALMSIQVRARIKRIKMAEEVIPPEISPPQHTESPCFQEYMTQPKQHQNMNVEEMLEALRSRSGPLDVKSRKYDSMAYYSKSESISKRENQLKKENHNNNNNNTTATTIITAPNSPEKYYRDMIDYLNPRSSIALSASQRHMAPPRQSWSSPKNYMNKTESSKAKTRSSSEPRQRPTKQGTKQKNSNSIESSTSSTSLKKNMLSNSARYDHWVVNSMKDSNRNSFGSYTVTNSDDSYYS 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g05037 393 Pfam IQ calmodulin-binding motif 132 146 IPR000048 GO:0005515
Trre14g05037 393 Pfam IQ calmodulin-binding motif 107 125 IPR000048 GO:0005515
Trre14g05037 393 Pfam Protein of unknown function (DUF4005) 298 375 IPR025064 -
Trre14g05037 393 MobiDBLite consensus disorder prediction 370 393 - -
Trre14g05037 393 PANTHER IQ-DOMAIN 5-RELATED 1 353 - -
Trre14g05037 393 MobiDBLite consensus disorder prediction 290 356 - -
Trre14g05037 393 MobiDBLite consensus disorder prediction 290 317 - -
Trre14g05037 393 MobiDBLite consensus disorder prediction 250 267 - -
Trre14g05037 393 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 71 147 IPR027417 -
Trre14g05037 393 ProSiteProfiles IQ motif profile. 106 133 IPR000048 GO:0005515
Trre14g05037 393 MobiDBLite consensus disorder prediction 248 267 - -
Trre14g05037 393 Gene3D - 102 157 - -
Trre14g05037 393 ProSiteProfiles IQ motif profile. 129 156 IPR000048 GO:0005515
Trre14g05037 393 MobiDBLite consensus disorder prediction 327 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g05037 Trre-Chr14 56773296 56775401 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g05037 1 337 IQD Protein Family AT4G14750 33.146 1.16e-32 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g05037 - - psat:127129486 528.865