Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g05035 ATGTTGAATGAAGGCCGAGAAGGAGGATCGGAGGAGTTTGAGTTAGAGCAATTGAGGACAACAACAACTAGTACTAGTCTTCTTCATTCCTCTTCTGCTACAAGTGCAAACAATAACACCTTTCACTACATACCCTTAATTCATCCTCCTCCTAATAATTACAACAACCACCCTTCAACTTCCAATTCTCAATTTCAAACTCAATCAAACTTCTTTCCTCCATCAATGTTATTGCCTCACCACTCTCCTAAACATAATAATTATCACAACTTCAATTTCCAGATCCAAACTCCGCCACCTCCATTCATCGATTCCACCTGGACCAACCATGAACTTCTTGCACTCTTCAAGATCACATCTACCATTCACAATTTCTTCCCAGATCAACTCATCACATGGGACCATGTCTCAAGGAAGCTAGCAGAGATTGGGATTAACAAGAGTGCTGAGAAGTGTAAGGATAAGTTTGAAGATGATAGCATATCATCACTTTTTAAGATTCATAATAATCATAATAATGATGATTACCCTCGGTTTATTAGTGAGCTTCAAGATCTTTATCAAGGTGGTGTTGGTGTTGATAAACAACAAATTTCAGATGAAAAGGAAGAAACCCAACAACACCAAGAAGAAAATTCAAGAGATAATAATGATGATACCGATATAGTAGTAGTGACCAAACAATGTGATGATGATGAGAAGGTGATGGAAAAATCAAAGAGAAAGAGGAAGAAACGCAATAGGTTTGAAATGTTGAAGAGTTTTTGTGAGAAAGTGGTTAACAAAATGATGGTACAACAAGAAGAGATACACAATAAGCTACTTGAAGATATGATCAAAAGAGATGAAGAGAAACTTGCTAGAGAGGAAGCATGGAAAAATCAAGAGATAGAAAGGATGAACATGATGGCACAAGAACAAGCTATTGCAAGTAATAGACAATCCACCATAATTGATTTCTTGAACAAATATCTATCCATAGATGGAAATGGTAAAGGATGTTCTTCTTCACAAAACCCTAATGATATTCAGCCTTCTAACAATATTCTTGAAGTTGAATCAACACCTTCTTGTTCTAATGTGATAGCACAAGGACAACAAAACCCTAGCTCAAGTGAGACAGTAGTAGAGTCAAATTACACTTCTACCCTTGTTGTGCCAACAATAATAATGGAGAAATTAGAGGATAGGAGAAGGTGGCCAAGAGATGAAGTGTTGGCACTCATAAACCTCAAGTCTACTACAAGTGTAATAAATAGAAGCAACAATGTTGAAGAAAAAGAAGGAAATAGTAACATTAAGGGACCATTGTGGGAGAGAATCTCTGAAGGGATGTTAGAGATGGGATACAAGAGAAGTGCAAAGAGATGTAAAGAAAAATGGGAAAATATAAACAAGTATTTTAAGAAAACAAAAGATGTTGCCAATAAGAAGAAAAGGTCATTGGATTCTAGGACATGTCCTTATTTTCATCAACTTAGTTCTTTGTATAATAATCAGCAGCAGGAGGGAAAACTAATTGTTCAATCTCAATCTCAATCTCAATTAGTAGTAACAAATCCAATCTCAAATTCAGCTGACCAAGTAGATGATCAACTACAAGCTCAGTCTTCTGATTCTCCAGTAGGGTCTAAGAATGATGCAGCATGTTGA 1653 0.3624 MLNEGREGGSEEFELEQLRTTTTSTSLLHSSSATSANNNTFHYIPLIHPPPNNYNNHPSTSNSQFQTQSNFFPPSMLLPHHSPKHNNYHNFNFQIQTPPPPFIDSTWTNHELLALFKITSTIHNFFPDQLITWDHVSRKLAEIGINKSAEKCKDKFEDDSISSLFKIHNNHNNDDYPRFISELQDLYQGGVGVDKQQISDEKEETQQHQEENSRDNNDDTDIVVVTKQCDDDEKVMEKSKRKRKKRNRFEMLKSFCEKVVNKMMVQQEEIHNKLLEDMIKRDEEKLAREEAWKNQEIERMNMMAQEQAIASNRQSTIIDFLNKYLSIDGNGKGCSSSQNPNDIQPSNNILEVESTPSCSNVIAQGQQNPSSSETVVESNYTSTLVVPTIIMEKLEDRRRWPRDEVLALINLKSTTSVINRSNNVEEKEGNSNIKGPLWERISEGMLEMGYKRSAKRCKEKWENINKYFKKTKDVANKKKRSLDSRTCPYFHQLSSLYNNQQQEGKLIVQSQSQSQLVVTNPISNSADQVDDQLQAQSSDSPVGSKNDAAC 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g05035 550 MobiDBLite consensus disorder prediction 53 68 - -
Trre14g05035 550 PANTHER FI21293P1 103 537 - -
Trre14g05035 550 Pfam Myb/SANT-like DNA-binding domain 397 495 IPR044822 -
Trre14g05035 550 MobiDBLite consensus disorder prediction 49 68 - -
Trre14g05035 550 Coils Coil 265 285 - -
Trre14g05035 550 MobiDBLite consensus disorder prediction 522 544 - -
Trre14g05035 550 Gene3D - 107 160 - -
Trre14g05035 550 Gene3D - 400 470 - -
Trre14g05035 550 MobiDBLite consensus disorder prediction 522 550 - -
Trre14g05035 550 MobiDBLite consensus disorder prediction 196 220 - -
Trre14g05035 550 CDD GT1 398 472 - -
Trre14g05035 550 ProSiteProfiles Myb-like domain profile. 397 465 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g05035 Trre-Chr14 56764289 56766371 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g05035 107 498 Trihelix Transcription Factor Family AT5G28300 38.445 1.16e-77 255
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Trre14g05035 Myb_DNA-bind_4 3.7e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g05035 - - tpra:123890829 822.387