Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g05028 ATGAATGGTGAAACAGATGACTCTGACTTTGTTGAAGTTGATCCAACCGGTAGATATGGCAGATACAATGAAGTTCTTGGTAAAGGAGCTTCCAAGACAGTATATAGAGCATTTGATGAGTATCAAGGAATTGAAGTTGCTTGGAATCAAATCAAACTATATGATTTCTTGCAAAACCCCGAAGATCTCGAGAGGCTTTACAGTGAAATTCATCTTCTCAAGACATTGAAACACAGTAACATTATGAAATTTTACACATCTTGGGTTGATACTGCAAATAGGAATATCAATTTTGTCACTGAATTGTTTACTTCTGGTACTCTTAGACAGTATAGGCAAAAGCACAAGAGGGTTAACATAAGAGCAGTGAAGCATTGGTGTAGACAGATCCTGCAAGGACTTCTATATCTTCATAGCCACAACCCACCTGTGATCCATAGAGATCTTAAATGTGATAATATTTTCATTAATGGTAACCAAGGGGAAGTTAAGATTGGGGATCTTGGTTTGGCTGCGGTTCTCCGGAAATCTCACGCTGCTCATTGTGTAGGAACGCCCGAATTCATGGCACCAGAAGTATACCAAGAGGAATATAATGAACTAGTTGACATATATTCTTTTGGTATGTGTGTATTAGAAATGGTTACATTTGAATATCCTTATAGTGAATGCAGCCATCCGGCACAAATCTACAAGAAAGTTTCTTCTGGGAAAAAACCAGATGCTTTGTATAAAGTGAAGGATCCAGAAGTGCGAGAATTCATTGAGAAATGCCTCGCAACAGTGTCTCTAAGACTCTCTGCAAGGGAGCTTCTGGATGATCCTTTTCTTCGAATTGATGATGACGAATATGATTTGAGATCGGCAGATGTTGTAGAGTTTGGTGACTTGGGTCCTCTTGTTTGTCAGTCATTCCTTTCACTCGACCGTAGCTATAGTAACATAAGTACTGAATATTCAAATGGTTTTGGGTACGACGTAGATTGGTATTCTCATCCGGCTGAGATTGAACATGGAATTGAACTTTTCGAGTGCCATGACGATGAACCCTCCAAAGATGTTGACATAAGCATCAAAGGCAAGAGAAAAGACGACGGTGGCATATTTTTGAGACTAAGAATTGCAGACAAAGAAGGTCATATCCGAAACATTTATTTCCCATTTGACATAGAGTTGGACACAGCATTAAGCGTAGCATCTGAAATGGTTGCGGAACTCGACATTATGGATCAGGATGTTATCAGCATAGCCGGTATGATAGATGGAGAAATTGCTTCCTTAGTACCCGAATGGAGGACTGAACCAGAAAATGAGGAAACCACCAACTATGCAAATCAAAGCTTCTGTGACAATTGTGTGTCTAATCATACTACAGTTACAGATTTTCTTTCACCTAATGAAGGTGGAAAAAACTTGCAGCTTCCTCAGTGCTGTACGCACGGATGTGCTTCAATGCACGGCCGGTTCGAGGAGATTATATTCCAATCCGAGGAGTATGACGACAACCACATTAGCGAGGATGCACCTAACATATCAAGTGAATCAGACTACTTGCAGTATCAGGAATCATGGAATCATCATGAAAGCCGTGAACTGAGTCCTGTTGAGTCTAGTCGAAGCCATTCAGGTGAACAATATGAACTATTAGATAAATCATTGTTGACCGAAGATAAAAGAGAGGCTGTATGGGAAAACAGTTTTGCACCCAACGCAGGAAAGTCCTCGAAAAATTTATCAGGAAACAATTATTTGTCTACTATTGATTCACTATATTGCGAGGTTAAGAGCGATTATGAGAAAGAGATCCAACATGAGTTGAGGTGGCTCAAAGCAAAATATCAGACGGAGTTAAGGGAACTTAGGGATCAACAATTCGTGGGTCTAGAAGCTAAATCTCCACATACTACTAGTAAGCACGAAACAACAGCAGAAACAGTAAATGGATTCCATAACAGGAACTATGATTCTAGTTACCATTCTCAAGAACACAAGAGCCACCCCAATTTGGATACCCGAAGGGCCCAAAATTGCGCGATGACATGTTCTGATGAAGATGTGGTAACTGCAAAGAGTTTTTACACAAGGTTATTGCTTCCAGACACACTACATAGAACTGTTTCCCTCCCTGTTGATGCTGTTGATGTATAA 2148 0.4008 MNGETDDSDFVEVDPTGRYGRYNEVLGKGASKTVYRAFDEYQGIEVAWNQIKLYDFLQNPEDLERLYSEIHLLKTLKHSNIMKFYTSWVDTANRNINFVTELFTSGTLRQYRQKHKRVNIRAVKHWCRQILQGLLYLHSHNPPVIHRDLKCDNIFINGNQGEVKIGDLGLAAVLRKSHAAHCVGTPEFMAPEVYQEEYNELVDIYSFGMCVLEMVTFEYPYSECSHPAQIYKKVSSGKKPDALYKVKDPEVREFIEKCLATVSLRLSARELLDDPFLRIDDDEYDLRSADVVEFGDLGPLVCQSFLSLDRSYSNISTEYSNGFGYDVDWYSHPAEIEHGIELFECHDDEPSKDVDISIKGKRKDDGGIFLRLRIADKEGHIRNIYFPFDIELDTALSVASEMVAELDIMDQDVISIAGMIDGEIASLVPEWRTEPENEETTNYANQSFCDNCVSNHTTVTDFLSPNEGGKNLQLPQCCTHGCASMHGRFEEIIFQSEEYDDNHISEDAPNISSESDYLQYQESWNHHESRELSPVESSRSHSGEQYELLDKSLLTEDKREAVWENSFAPNAGKSSKNLSGNNYLSTIDSLYCEVKSDYEKEIQHELRWLKAKYQTELRELRDQQFVGLEAKSPHTTSKHETTAETVNGFHNRNYDSSYHSQEHKSHPNLDTRRAQNCAMTCSDEDVVTAKSFYTRLLLPDTLHRTVSLPVDAVDV 715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g05028 715 ProSitePatterns Serine/Threonine protein kinases active-site signature. 144 156 IPR008271 GO:0004672|GO:0006468
Trre14g05028 715 Pfam Protein kinase domain 23 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g05028 715 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 369 422 IPR024678 GO:0004674|GO:0005524
Trre14g05028 715 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 6 644 - -
Trre14g05028 715 Gene3D Phosphorylase Kinase; domain 1 4 101 - -
Trre14g05028 715 ProSiteProfiles Protein kinase domain profile. 20 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g05028 715 FunFam Probable serine/threonine-protein kinase WNK1 5 101 - -
Trre14g05028 715 SMART serkin_6 20 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g05028 715 Gene3D Transferase(Phosphotransferase) domain 1 103 282 - -
Trre14g05028 715 CDD STKc_WNK 18 277 - -
Trre14g05028 715 Gene3D - 366 462 - -
Trre14g05028 715 SUPERFAMILY Protein kinase-like (PK-like) 23 278 IPR011009 -
Trre14g05028 715 FunFam probable serine/threonine-protein kinase WNK9 103 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g05028 Trre-Chr14 56709624 56712640 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g05028 1 513 MAP Kinase Kinase Kinase AT3G22420 56.475 0.0 592
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Trre14g05028 Pkinase 1.7e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g05028 K08867 - gmx:100775959 1073.92