Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g05024 ATGGCGGACAAAGCTGTTACGATCAGGACCAGGAAGTTCCTCACCAACCGTCTTCTTTCAAGAAAGCAATTCGTTGTTGAAGCTAATCATCCAGGGAAACCAAATGTTTCTAAGGTTGAGCTTAAGGAAAAGTTGGCAACAATGTATGGAGTGAAGGACAATGCTGTGTTCGTTTATGGATTCCGAACACAATTTGGAGGTGGCAAATCAACTGGTTTTGGTTTGATTTATGATTCTGTTGAAAGTGCAAAGAAGTATGAGCCTAAGTACAGGCTTATCAGGAATGGTCTTGACACCAAAGTTGAGAAGTCAAGGAAGCAAATGAAGGAGAGAAAGAATAGAGCTATGAAGATTCGTGGTGTGAAGAAGACCAAGGCCTCTGATGCTGCCAAGGGTGGAAAAAAGAAATAA 411 0.4161 MADKAVTIRTRKFLTNRLLSRKQFVVEANHPGKPNVSKVELKEKLATMYGVKDNAVFVYGFRTQFGGGKSTGFGLIYDSVESAKKYEPKYRLIRNGLDTKVEKSRKQMKERKNRAMKIRGVKKTKASDAAKGGKKK 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g05024 136 FunFam 40S ribosomal protein S24 1 136 - -
Trre14g05024 136 MobiDBLite consensus disorder prediction 101 136 - -
Trre14g05024 136 PANTHER 40S RIBOSOMAL PROTEIN S24 1 130 IPR001976 GO:0003735|GO:0005840|GO:0006412
Trre14g05024 136 Hamap 30S ribosomal protein S24e [rps24e]. 4 105 IPR001976 GO:0003735|GO:0005840|GO:0006412
Trre14g05024 136 Gene3D - 1 131 - -
Trre14g05024 136 ProSitePatterns Ribosomal protein S24e signature. 65 87 IPR018098 -
Trre14g05024 136 SUPERFAMILY Ribosomal proteins S24e, L23 and L15e 6 107 IPR012678 GO:0003735|GO:0005840|GO:0006412
Trre14g05024 136 Pfam Ribosomal protein S24e 25 102 IPR001976 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g05024 Trre-Chr14 56681200 56683139 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g05024 1 131 Cytoplasmic Ribosomal Protein Gene Family AT5G28060 77.273 2.29e-71 208
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g05024 K02974 - aew:130786212 211.075