Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g05023 ATGGCTTCACAGCAACACGACACCGTTTTCCCCGATGAAGACATCGACGACGAAGACGAAGAATTTCACGAATACGAAGAAGAAGAAGATGAAGAAGAAGACGACGTTTTAGTCGAAGACGAAGAAACCAATCCTTCTGCTTCTATCTCCGCTCCCTCCGTCACCGTTGCCGTTCCCGGTTCCGTCATCTCCAACGGAGAAACCAGACCTCCAATTTTGACTCCAACCGCAACAACGATCGTTTTCGCAAACTCTTTCTCCGATTCAAAACGCCAACGTTTGGATCAAATTGAAGAGAAAAAACCTCTGGAAGATTCACGTAAGCTTTTTCAACGTCTATGGACCGACGAAGACGAGATGGAGCTCTTACAAGGTTTTCTCGATTACACAACGCAGAGAGGTTCCTCTCATCACAACGACACCGCTCAATTCTACGATCAAATCAAATCGAAGCTCCAACTCGATTTCAACAAGAACCAGCTCGTAGAGAAGATCCGAAGGTTGAAGAAGAAATACCGAAACGTTCTAAACAAAATCAGTTCCGGTAAGGAATTCGTCTTCAAAACCGCTCACGATCAAGCTACTTTTGAAATCTCTCGCAAGATCTGGAACAACGTGGCGCCAATCGCCGGTGATATTGCCATTGACGACGAAGAAATCAACCTCAATCCTAGTCCCAACCCTAACCTCAATTTCACTCCCGTAATTCTCAAGTCTGAATCAACTTCGCATACGAGAAAGCGTTCACGGCCTCGATCTGCTATCAGAAGCTTCGAGAAACGTGAATCAAATGATGCATCAATCAGAGATCGTGATTATCTCAATATCAACCTCAACAATCCTAATCCATTTCCTAATCATAATTTTAATCCTAATCCTGTTGCTAATCCTATCATAGCTACTACTTCCGCTACTGTTAATACAGCAGCAGCAACAACAACAACACCTACAATTACTACTCCTCCTAATACTAATCCTGCAATTAATGCTAATAATTATAGTAACAATTGTAGTAGTAACATTGGGAACGGTGTAGCAGGTGTGATTGAAGAGACCGTGAGAAGTTGTTTATCGCCGTTGTTGAAGGAATTGATGACCAATGCAATGGGAGGACCGTTCGGAGCAAGAGGCAGTGGCGGTGGTGGTTTCGCGATGAATCCATTGCAGTTGATGAATTTAGGTTTTGGAGAAGTTGTGGATGAGAAATGGAGGAAGCAACAGATTTTGGAATTGGAAGTGTATTCAAAGAGATTGGAATTAGTTCAAGATCAGATCAAAGCATCTATTGATGAATTGCGTTCGGTTGGTGGATCAACCTTTTAG 1323 0.4301 MASQQHDTVFPDEDIDDEDEEFHEYEEEEDEEEDDVLVEDEETNPSASISAPSVTVAVPGSVISNGETRPPILTPTATTIVFANSFSDSKRQRLDQIEEKKPLEDSRKLFQRLWTDEDEMELLQGFLDYTTQRGSSHHNDTAQFYDQIKSKLQLDFNKNQLVEKIRRLKKKYRNVLNKISSGKEFVFKTAHDQATFEISRKIWNNVAPIAGDIAIDDEEINLNPSPNPNLNFTPVILKSESTSHTRKRSRPRSAIRSFEKRESNDASIRDRDYLNINLNNPNPFPNHNFNPNPVANPIIATTSATVNTAAATTTTPTITTPPNTNPAINANNYSNNCSSNIGNGVAGVIEETVRSCLSPLLKELMTNAMGGPFGARGSGGGGFAMNPLQLMNLGFGEVVDEKWRKQQILELEVYSKRLELVQDQIKASIDELRSVGGSTF 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g05023 440 PANTHER BNAANNG10740D PROTEIN-RELATED 26 431 IPR007592 GO:0006355
Trre14g05023 440 MobiDBLite consensus disorder prediction 11 41 - -
Trre14g05023 440 MobiDBLite consensus disorder prediction 1 52 - -
Trre14g05023 440 Coils Coil 158 178 - -
Trre14g05023 440 Coils Coil 15 35 - -
Trre14g05023 440 MobiDBLite consensus disorder prediction 238 266 - -
Trre14g05023 440 Pfam Protein of unknown function, DUF573 110 204 IPR007592 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g05023 Trre-Chr14 56676812 56678134 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g05023 1 435 GeBP Transcription Factor Family AT5G28040 39.570 1.63e-88 274
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Trre14g05023 DUF573 1e-33 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g05023 - - psat:127132285 547.354