Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g05020 ATGACTTCATCACCATTACTGTTCACAGTGCGGAGGCGGCCACCAGTGTTGGTGCCACCGGCTGCTTCCACTCCTTCTGAAGTTAAACTACTATCCGATATAGATGATCAACAAGGCCTACGTTTCAATATTCCTTTCATATTTATCTATCGTAACGAACCATCAATGACGGGGAAAGATCCTGTTAAAGTTCTTAAAGATGCACTCTCACAAACACTTGTTTATTACTATCCATTTGCAGGAAGGATTAGAGAGGGTGTTGGGCGCAAGTTGATGGTTGATTGTACCGGCGAAGGTGTCATGTTTGTTGAAGCTGAAGCTGATGTAACACTTGATCAATTTGGTGACTCTCTCCAACCACCATTCCCTTGCTTCCAAGAACTTCTACATGATGTTGAAGACTCCGAATTAATTATTGACCGTCCCATTCGACTCATACAGGTCACACGTCTCAAGTGCGGTGGCTTCATTCTAGTTTTGTATTTGAACCATATAATGAGCGATGGAGCTGGTACAAAACAATTCATGAATGCCTGGACAGAAATGGCTCTAGGAGCACATCAACCTTCCATTCAACCTGTGTGGCATAGGGAGATTTTAATGGCAAGAGATCCACCACATATTACATGCAACCATCGTGAATACGAACAAACACTTTGGCCAAATACCATCAAGGAAGAAAATACTATCAACATAGTCCATCAATCTTTCTTCTTTAGATCTTCTGATATAGCTGCACTTCGTCGCTTGGTTCCACATCAATGTACTACGTTTGATGTTATCACTGCATGTTTTTGGTGTTGTCGCACAAAAGCATTGCAGTTACAACCAGATGAAGAGGTGCGAATGATGTGCATCGTCAATGCACGCCCGAGGTTTAGTGATAAACATTCACTTGTCGGGTATTATGGTAATTGTTTTGCTTATCCGGCGACCATCACCACTGCAGGGAAGCTTTGTGAAAACGGACTTGGTTATGCAGTGGAATTGATACGAAAAGCAAAAATAGAAGTTACGGAGGAATACATGCATTCTGTGGCAGATCTTATGGTTATTACGGAACGATGTTTATTTACAACTAAAGGGACTTGTATTATTTCTGATCTCACTCGTGCTAAGTTTAGAGAAGTGAATTTTGGATGGGGTGAAGCGGTGTATGGTGGAGTTGCAAAAGGTGGAGCTGGACCTTTTCCTGGTGTAACCTATATTGTCCCACATAAGAATGCAAAAGGAGAAGAAGGTTTGATATTACCAATTTCTTTGTCCTCTCAAGATATGAAGAGGTTTGCTAAAGAGTTAGATAAAATGCTTGATAGATGA 1320 0.4136 MTSSPLLFTVRRRPPVLVPPAASTPSEVKLLSDIDDQQGLRFNIPFIFIYRNEPSMTGKDPVKVLKDALSQTLVYYYPFAGRIREGVGRKLMVDCTGEGVMFVEAEADVTLDQFGDSLQPPFPCFQELLHDVEDSELIIDRPIRLIQVTRLKCGGFILVLYLNHIMSDGAGTKQFMNAWTEMALGAHQPSIQPVWHREILMARDPPHITCNHREYEQTLWPNTIKEENTINIVHQSFFFRSSDIAALRRLVPHQCTTFDVITACFWCCRTKALQLQPDEEVRMMCIVNARPRFSDKHSLVGYYGNCFAYPATITTAGKLCENGLGYAVELIRKAKIEVTEEYMHSVADLMVITERCLFTTKGTCIISDLTRAKFREVNFGWGEAVYGGVAKGGAGPFPGVTYIVPHKNAKGEEGLILPISLSSQDMKRFAKELDKMLDR 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g05020 439 PANTHER ACYL TRANSFERASE 4 8 437 - -
Trre14g05020 439 Pfam Transferase family 17 435 - -
Trre14g05020 439 Gene3D - 214 433 IPR023213 -
Trre14g05020 439 Gene3D - 9 213 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g05020 Trre-Chr14 56646710 56649899 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g05020 13 433 Monolignol Biosynthesis Gene Families AT5G48930 28.702 2.06e-48 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g05020 K19861 - gmx:100787907 576.63