Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g05018 ATGACTTCATCATCAATGTTAAAATTCAGAGTGCAAAGGTGCCAATCAGAATTGGTGCCACCAGCTGCACCCACTCCTCATGAAATAAAACTACTATCTGACATAGATAATCAAGAATGTTTGCGTTTTAATTTTCCTATGATATTTATCTATCATCATCAACCATCAATGAAAGAGAAAGACCCTATTAAAGTTCTTAGACATGCACTCTCTCAAACACTTGTTTATTACTATCCATTTGCAGGAAGAATATTAAGGGAGGGAGCTAGGGGCAAGTTGATGGTGGATTGTACTGGTGAAGGTGTCATGTTCATTGAAGTTGAAGCTGATGTAACACTTGATCAATTTGGTGACTCTTTGCATCCTCCATTCCCTTGGTTCCAACAACTCTTAGATGATGTTCATGGAACCCAACAAATTATTGATCATCACATTTTACTCATACAGGTCTAA 453 0.3731 MTSSSMLKFRVQRCQSELVPPAAPTPHEIKLLSDIDNQECLRFNFPMIFIYHHQPSMKEKDPIKVLRHALSQTLVYYYPFAGRILREGARGKLMVDCTGEGVMFIEVEADVTLDQFGDSLHPPFPWFQQLLDDVHGTQQIIDHHILLIQV 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g05018 150 Gene3D - 9 150 IPR023213 -
Trre14g05018 150 PANTHER ACYL TRANSFERASE 4 6 132 - -
Trre14g05018 150 Pfam Transferase family 10 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g05018 Trre-Chr14 56635480 56635932 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g05018 10 150 Monolignol Biosynthesis Gene Families AT5G48930 31.915 2.16e-14 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g05018 K19861 - mtr:25488955 195.667