Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g05017 ATGACTTCATCATCAATGTTAAAATTCAGAGTGCAAAGGTGCCAATCAGAATTGGTGCCACCAGCTGCACCCACTCCTCATGAAATAAAACTACTATCTGACATAGATAATCAAGAATGTTTGCGTTTTAATTTTCCTATGATATTTATCTATCATCATCAACCATCAATGAAAGAGAAAGACCCTATTAAAGTTCTTAGACATGCACTCTCTCAAACACTTGTTTATTACTATCCATTTGCAGGAAGAATATTAAGGGAGGGAGCTAGGGGCAAGTTGATGGTGGATTGTACTGGTGAAGGTGTCATGTTCATTGAAGTTGAAGCTGATGTAACACTTGATCAATTTGGTGACTCTTTGCATCCTCCATTCCCTTGGTTCCAACAACTCTTAGATGATGTTCATGGAACCCAACAAATTATTGATCATCACATTTTACTCATACAGGTGACTCAACTCAAGTGCGGTGGTTTCATATTGTCCTTAAATTGTAACCATGCAATTTTAGATGCAACTGGTTTGAAACAATTCATGAATGCTTGGGCAGAAATGGCTCGAGGAGCACATCAACCTTCCATTCAACCTATTTGGCGAAGAGAGCTCCTAATGGCAAGAAACCCACCACGTGTTACATGCAACCATCATGAATTCGAACAAATTATACTTCCTCCAAATACCATCAAGGAAGAAAATGCTACTACCACAGTCCATCAATCTTTCTTCTTTACACCTGCTCACGTAGCTGCAATTCGTTGCTTAGTTCCACTCCATCTTCATCAATGCACCGCATTCGATCTTATCACTGCATGCTTTTGGTGTTGTCACACAAAAGCATTGCAGTTAGAGCCAGAGGAAGAAGTACGAATGATGTGCATCGTAAATGCACGTTCTAGGTTTACTGCCAACCATCTGTCACTTGTTGGATATTATGGTTATGCAGTGGAATTGATAAAAAAAGCAAAAGCCCGTGTTACCGAAGAATACATGCATTCTTTGGCGGATCTTACCGTTATTAAAGAAAGATGTTTATATACAACCGTAAGGTCTTGTATTGTATCAGACATGACCCGTGCTAAGTTCAAAAATGTGAATTTCGGATGGGGTGAGGCTGTGTATGGCGGAGTGGTAAAAGGCGGGTTTGGACCGTTACCTGGAGCATCGTATATAATTCCACATAAGAATGCAAAAGAAGAAGGTTTAATATTATTAACTTGCTTGCCCTATGAAGATATGAAAAGGTTTGCTGAAGAGTTAGATAAGATGTTGGGTAACCAAAATAAACCTACAACCTTTGGTCCTAGTTTGGTGATGTCTGCTTTATAG 1323 0.3938 MTSSSMLKFRVQRCQSELVPPAAPTPHEIKLLSDIDNQECLRFNFPMIFIYHHQPSMKEKDPIKVLRHALSQTLVYYYPFAGRILREGARGKLMVDCTGEGVMFIEVEADVTLDQFGDSLHPPFPWFQQLLDDVHGTQQIIDHHILLIQVTQLKCGGFILSLNCNHAILDATGLKQFMNAWAEMARGAHQPSIQPIWRRELLMARNPPRVTCNHHEFEQIILPPNTIKEENATTTVHQSFFFTPAHVAAIRCLVPLHLHQCTAFDLITACFWCCHTKALQLEPEEEVRMMCIVNARSRFTANHLSLVGYYGYAVELIKKAKARVTEEYMHSLADLTVIKERCLYTTVRSCIVSDMTRAKFKNVNFGWGEAVYGGVVKGGFGPLPGASYIIPHKNAKEEGLILLTCLPYEDMKRFAEELDKMLGNQNKPTTFGPSLVMSAL 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g05017 440 PANTHER ACYL TRANSFERASE 4 313 422 - -
Trre14g05017 440 Gene3D - 223 418 IPR023213 -
Trre14g05017 440 Pfam Transferase family 313 420 - -
Trre14g05017 440 Pfam Transferase family 11 300 - -
Trre14g05017 440 Gene3D - 9 219 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g05017 Trre-Chr14 56635480 56640092 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g05017 10 418 Monolignol Biosynthesis Gene Families AT5G48930 27.540 8.09e-40 146
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g05017 K19861 - gmx:100792864 523.857