Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g05016 ATGGCTTCATCTCCATTGATGTTTACAGTTCGGAGGTCCCAACCAGAGTTGGTGCGTCCAGCTGCACCGACTCCTCGTGAAATTAAATTACTATCCGATATAGATGATCAACAAGGCCTCCGTTTCAATCTTCCTTTCATATTTGTCTTTCGTCATGAACCATTAATGTCACAGAAAGATCCTATTAAAGTTCTTAAACATGCACTCTCAAAAACACTTGTTTATTTCTATCCAGGTGCAGGAAGGATTAGGGAGGGTGTTGGGCGCAAGTTGATGGTGGATTGTACCGGTGAAGGTGTCATGTTCGTTGAAGCTGAAGCTGATGTAACACTCGATCAATTTGGTGATGCTCTGCAACCTCCATTCCCTTGTTTCCAAGAAATTCTACATGATGTTCCTGGCTCAGAATATATTATTGATCGTCCCATTCGACTTATACAGGTCACACGTCTCAAATGTGGGGGTTTTATATTGGCCTTGAGTTTAAACCATACTTTGGGCGATGCAGTTGGTTTAAGACTATTCATAAATGCGTGGGCAGAAATGGCTCGAGGAGTAAATCAACCTTCTATTCTACCTGTGTGGCGTAGAGAGATCCTAATGGCAAGAGATCCACCACACATTACATGCAACCATCGTGAATATGAACAAATTATACTTCCTCCAAATACCATCAAGGAAGAAGATACTACTACCACAATCCATCAATCATTCTTCTTTACACCTGCTCACATAGCTGCAATTCGTTGCTTGGTTCCAATTCATCTTCGTCAATGCACTGCATTCGATCTTATCGCTGCATGCTATTGGTGTTGCCGCACAAAAGCATTGCAGTTAAAGCCAGAGGAAGAGGCTCGAATGATGTGCGTCGTTAATGCACGCTCGAGGTTTGCTGCTAACGACTCATCACTTCTTGGATATTATGGTAATTGTATTGCTTTCCCTGCGGCTGTCACCACCGCAGGGAAGCTTTGTGGAAACCCACTAGGTTATGCAGTAGAGTTGATAAGAAAAGCAAAAGCTCAAGTTACAAAGGAATACATGCATTCTGTGGCTGATCTTATGGTCATTAAGGAACGATGTTCATTTACAGACTTAAGGTCTTGTATTGTGTCAGATTGGACTCGTGCTAAGTTTGCAGAAGTTGATTTTGGATGGGGTGGACCGGTGTATAGTGGAGCGGCAAAGGGTGGACTTGGATATTTTTCTGGAGGAACATTTATTGTCCCACATAAGAATGCAAAAGGAGAAGAAGGTCTAATATTACCAATATGCTTGCCATCTGAAGATATGAAGAGGTTTGCCAAAGAGTTAGATGAAATGCTTGGTAGCCAAAATCATACTATAAGTGGGTCTAGTTTTGTCACGTCTGCTATATAG 1380 0.421 MASSPLMFTVRRSQPELVRPAAPTPREIKLLSDIDDQQGLRFNLPFIFVFRHEPLMSQKDPIKVLKHALSKTLVYFYPGAGRIREGVGRKLMVDCTGEGVMFVEAEADVTLDQFGDALQPPFPCFQEILHDVPGSEYIIDRPIRLIQVTRLKCGGFILALSLNHTLGDAVGLRLFINAWAEMARGVNQPSILPVWRREILMARDPPHITCNHREYEQIILPPNTIKEEDTTTTIHQSFFFTPAHIAAIRCLVPIHLRQCTAFDLIAACYWCCRTKALQLKPEEEARMMCVVNARSRFAANDSSLLGYYGNCIAFPAAVTTAGKLCGNPLGYAVELIRKAKAQVTKEYMHSVADLMVIKERCSFTDLRSCIVSDWTRAKFAEVDFGWGGPVYSGAAKGGLGYFSGGTFIVPHKNAKGEEGLILPICLPSEDMKRFAKELDEMLGSQNHTISGSSFVTSAI 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g05016 459 PANTHER ACYL TRANSFERASE 4 7 442 - -
Trre14g05016 459 Gene3D - 217 438 IPR023213 -
Trre14g05016 459 Gene3D - 7 216 IPR023213 -
Trre14g05016 459 Pfam Transferase family 13 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g05016 Trre-Chr14 56630701 56633237 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g05016 17 441 Monolignol Biosynthesis Gene Families AT5G48930 31.081 2.48e-55 188
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g05016 K19861 - gmx:100792864 582.793